RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 MPP2Q14168 576 aa17.7■□□□□ 0.42
MBD4-202ENST00000393278 TMC5Q6UXY8 1006 aa17.7■□□□□ 0.42
MBD4-202ENST00000393278 ARID3BQ8IVW6 561 aaPredicted RBP17.7■□□□□ 0.42
MBD4-202ENST00000393278 APCDD1Q8J025 514 aa17.7■□□□□ 0.42
MBD4-202ENST00000393278 C4orf33Q8N1A6 199 aa17.7■□□□□ 0.42
MBD4-202ENST00000393278 ATXN2LQ8WWM7 1075 aaKnown RBP17.7■□□□□ 0.42
MBD4-202ENST00000393278 ZNF778Q96MU6 729 aa17.7■□□□□ 0.42
MBD4-202ENST00000393278 C2orf49Q9BVC5 232 aaPredicted RBP17.7■□□□□ 0.42
MBD4-202ENST00000393278 NOD2Q9HC29 1040 aa17.7■□□□□ 0.42
MBD4-202ENST00000393278 SSU72Q9NP77 194 aaKnown RBP17.7■□□□□ 0.42
MBD4-202ENST00000393278 INTS9Q9NV88 658 aaKnown RBP17.7■□□□□ 0.42
MBD4-202ENST00000393278 IL1RAPL1Q9NZN1 696 aa17.7■□□□□ 0.42
MBD4-202ENST00000393278 ZFATQ9P243 1243 aa17.7■□□□□ 0.42
MBD4-202ENST00000393278 TBC1D14Q9P2M4 693 aa17.7■□□□□ 0.42
MBD4-202ENST00000393278 SMG5Q9UPR3 1016 aaKnown RBP17.7■□□□□ 0.42
MBD4-202ENST00000393278 MIA3Q5JRA6 1907 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 INSIG1O15503 277 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 KRT38O76015 456 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 PENKP01210 267 aaPredicted RBP17.69■□□□□ 0.42
MBD4-202ENST00000393278 MT-ND3P03897 115 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 KRT4P19013 534 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 CDK18Q07002 472 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 MSLNQ13421 630 aaPredicted RBP17.69■□□□□ 0.42
MBD4-202ENST00000393278 CBX2Q14781 532 aaPredicted RBP17.69■□□□□ 0.42
MBD4-202ENST00000393278 SIRPB2Q5JXA9 342 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 PACS1Q6VY07 963 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 TMEM25Q86YD3 366 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 MTBPQ96DY7 904 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 IFT43Q96FT9 208 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 LMLNQ96KR4 655 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 NUDCD1Q96RS6 583 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 RANBP9Q96S59 729 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 SLC17A6Q9P2U8 582 aa17.69■□□□□ 0.42
MBD4-202ENST00000393278 RANBP2P49792 3224 aaKnown RBP17.69■□□□□ 0.42
MBD4-202ENST00000393278 FAM47DPA6NHR8 397 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 HLA-DPA1P20036 260 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 CNTFP26441 200 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 SCNN1BP51168 640 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 PLK1P53350 603 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 SLC18A1P54219 525 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 RETSATQ6NUM9 610 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 KCNMB4Q86W47 210 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 ANKRD42Q8N9B4 389 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 ACDQ96AP0 544 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 ALKBH8Q96BT7 664 aaKnown RBP17.68■□□□□ 0.42
MBD4-202ENST00000393278 EXOC2Q96KP1 924 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 SCUBE2Q9NQ36 999 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 DZANK1Q9NVP4 752 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 LHX3Q9UBR4 397 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 TRANK1O15050 2925 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 MYLKQ15746 1914 aa17.68■□□□□ 0.42
MBD4-202ENST00000393278 HEATR9A2RTY3 570 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 SRRM3A6NNA2 597 aaPredicted RBP17.67■□□□□ 0.42
MBD4-202ENST00000393278 TRIM49D1C9J1S8 452 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 TYROBPO43914 113 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 SPAG7O75391 227 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 FGF1P05230 155 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 WEE1P30291 646 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 GBP2P32456 591 aaPredicted RBP17.67■□□□□ 0.42
MBD4-202ENST00000393278 CD70P32970 193 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 NSUN2Q08J23 767 aaKnown RBP eCLIP17.67■□□□□ 0.42
MBD4-202ENST00000393278 SLC12A1Q13621 1099 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 PLEKHG6Q3KR16 790 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 TEDDM1Q5T9Z0 273 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 PDPK2PQ6A1A2 396 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 IRF7Q92985 503 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 OTUB2Q96DC9 234 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 MRPL38Q96DV4 380 aaKnown RBP17.67■□□□□ 0.42
MBD4-202ENST00000393278 SERAC1Q96JX3 654 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 NSMCE3Q96MG7 304 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 TRIB3Q96RU7 358 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 TREX1Q9NSU2 369 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 C20orf96Q9NUD7 363 aaPredicted RBP17.67■□□□□ 0.42
MBD4-202ENST00000393278 NKIRAS1Q9NYS0 192 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 PSAT1Q9Y617 370 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 CCDC78A2IDD5 438 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 HMX2A2RU54 273 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 GP5P40197 560 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 SLC18A2Q05940 514 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 BMPR2Q13873 1038 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 SEPT6Q14141 434 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 SMAD1Q15797 465 aaKnown RBP17.67■□□□□ 0.42
MBD4-202ENST00000393278 ESRP1Q6NXG1 681 aaKnown RBP17.67■□□□□ 0.42
MBD4-202ENST00000393278 SH2D5Q6ZV89 423 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 CNPY4Q8N129 248 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 MGARPQ8TDB4 240 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 PPP2R3CQ969Q6 453 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 CPNE1Q99829 537 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 LINC00597Q9H2U6 94 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 SPHK2Q9NRA0 654 aa17.67■□□□□ 0.42
MBD4-202ENST00000393278 INTS6Q9UL03 887 aaKnown RBP17.67■□□□□ 0.42
MBD4-202ENST00000393278 FCF1Q9Y324 198 aaKnown RBP17.67■□□□□ 0.42
MBD4-202ENST00000393278 ARIH1Q9Y4X5 557 aaPredicted RBP17.67■□□□□ 0.42
MBD4-202ENST00000393278 CXorf51AA0A1B0GTR3 108 aa17.66■□□□□ 0.42
MBD4-202ENST00000393278 RFXAPO00287 272 aa17.66■□□□□ 0.42
MBD4-202ENST00000393278 NDST3O95803 873 aa17.66■□□□□ 0.42
MBD4-202ENST00000393278 MT-CO1P00395 513 aa17.66■□□□□ 0.42
MBD4-202ENST00000393278 RHOAP61586 193 aa17.66■□□□□ 0.42
MBD4-202ENST00000393278 HSP90AA5PQ58FG0 334 aa17.66■□□□□ 0.42
MBD4-202ENST00000393278 RNF135Q8IUD6 432 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms