RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 OR1D2P34982 312 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 CDH4P55283 916 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 POU4F1Q01851 419 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 ASPHQ12797 758 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 CNGA3Q16281 694 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 NADSYN1Q6IA69 706 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 KIAA1841Q6NSI8 718 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 NEPROQ6NW34 567 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 CNKSR3Q6P9H4 555 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 SLC39A5Q6ZMH5 540 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 PLD6Q8N2A8 252 aaKnown RBP23.36■■□□□ 1.33
VPS16-201ENST00000380443 FBXO6Q9NRD1 293 aaPredicted RBP23.36■■□□□ 1.33
VPS16-201ENST00000380443 STK38LQ9Y2H1 464 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 ACOT9Q9Y305 439 aa23.36■■□□□ 1.33
VPS16-201ENST00000380443 A0A087X1B8 175 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 ESRRAP11474 423 aaPredicted RBP23.35■■□□□ 1.33
VPS16-201ENST00000380443 STMN1P16949 149 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 RAB10P61026 200 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 SMAD1Q15797 465 aaKnown RBP23.35■■□□□ 1.33
VPS16-201ENST00000380443 C1orf53Q5VUE5 145 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 ALG1LQ6GMV1 187 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 ARRDC2Q8TBH0 407 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 MYRFLQ96LU7 910 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 C1QTNF1Q9BXJ1 281 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 CWH43Q9H720 699 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 CAB39LQ9H9S4 337 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 ARL8BQ9NVJ2 186 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 RIMKLBQ9ULI2 386 aa23.35■■□□□ 1.33
VPS16-201ENST00000380443 APOBEC2Q9Y235 224 aaKnown RBP23.35■■□□□ 1.33
VPS16-201ENST00000380443 TET1Q8NFU7 2136 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 SLC7A4O43246 635 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 ITM2AO43736 263 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 ABLIM3O94929 683 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 SNUPNO95149 360 aaKnown RBP23.34■■□□□ 1.33
VPS16-201ENST00000380443 HLA-DPA1P20036 260 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 CCND1P24385 295 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 GABRB3P28472 473 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 RFC2P35250 354 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 ATN1P54259 1190 aaPredicted RBP23.34■■□□□ 1.33
VPS16-201ENST00000380443 CCL23P55773 120 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 ITGA9Q13797 1035 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 SEPT6Q14141 434 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 PCSK7Q16549 785 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 HSF5Q4G112 596 aaPredicted RBP23.34■■□□□ 1.33
VPS16-201ENST00000380443 ZYG11AQ6WRX3 759 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 LGI2Q8N0V4 545 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 ZNF461Q8TAF7 563 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 UTP4Q969X6 686 aaKnown RBP23.34■■□□□ 1.33
VPS16-201ENST00000380443 FEM1CQ96JP0 617 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 ZNF512Q96ME7 567 aaPredicted RBP23.34■■□□□ 1.33
VPS16-201ENST00000380443 DDX50Q9BQ39 737 aaKnown RBP23.34■■□□□ 1.33
VPS16-201ENST00000380443 FBXO5Q9UKT4 447 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 NUMBLQ9Y6R0 609 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 DNAH12Q6ZR08 3092 aa23.34■■□□□ 1.33
VPS16-201ENST00000380443 ZNF840PA6NDX5 716 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 CAPN14A8MX76 684 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 KLHL2O95198 593 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 DSC2Q02487 901 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 MSLNQ13421 630 aaPredicted RBP23.33■■□□□ 1.33
VPS16-201ENST00000380443 WASHC2DQ5SRD0 308 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 LONP2Q86WA8 852 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 TRMT2BQ96GJ1 504 aaKnown RBP23.33■■□□□ 1.33
VPS16-201ENST00000380443 RILPQ96NA2 401 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 KLHL5Q96PQ7 755 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 SORT1Q99523 831 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 NMUR2Q9GZQ4 415 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 NACA2Q9H009 215 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 ZNF395Q9H8N7 513 aaPredicted RBP23.33■■□□□ 1.33
VPS16-201ENST00000380443 OXSMQ9NWU1 459 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 TRPM5Q9NZQ8 1165 aa23.33■■□□□ 1.33
VPS16-201ENST00000380443 FAM95CA0A1B0GW59 222 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 MROH6A6NGR9 719 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 GOLGA8TH3BQL2 631 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 CLDN11O75508 207 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 SOD2P04179 222 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 FGF1P05230 155 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 KITP10721 976 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 CES1P23141 567 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 LEPRP48357 1165 aaKnown RBP23.33■■□□□ 1.32
VPS16-201ENST00000380443 CLCN5P51795 746 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 ZNF235Q14590 738 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 RFTN1Q14699 578 aaPredicted RBP23.33■■□□□ 1.32
VPS16-201ENST00000380443 CHST9Q7L1S5 443 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 SLC25A41Q8N5S1 370 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 STON2Q8WXE9 905 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 TSPAN17Q96FV3 270 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 ACE2Q9BYF1 805 aaPredicted RBP23.33■■□□□ 1.32
VPS16-201ENST00000380443 MMADHCQ9H3L0 296 aaPredicted RBP23.33■■□□□ 1.32
VPS16-201ENST00000380443 TASP1Q9H6P5 420 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 PDFQ9HBH1 243 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 ZNF358Q9NW07 568 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 MAFFQ9ULX9 164 aa23.33■■□□□ 1.32
VPS16-201ENST00000380443 SLC35E2BP0CK96 405 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 SLC1A2P43004 574 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 CHRNA4P43681 627 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 KCNQ1P51787 676 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 SLC12A2P55011 1212 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 IRF9Q00978 393 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 DLG2Q15700 870 aa23.32■■□□□ 1.32
VPS16-201ENST00000380443 LRRC26Q2I0M4 334 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms