RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 BPNT1O95861 308 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 ALDOAP04075 364 aaKnown RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 ITGA2BP08514 1039 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 TROVE2P10155 538 aaKnown RBP eCLIP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 TPSB2P20231 275 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 MPP1Q00013 466 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 BST1Q10588 318 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 TPSAB1Q15661 275 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 ARCQ7LC44 396 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 PTAR1Q7Z6K3 402 aaPredicted RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 MILR1Q7Z6M3 343 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 KCNMB4Q86W47 210 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 MZB1Q8WU39 189 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 NTAN1Q96AB6 310 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 TEKT5Q96M29 485 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 SERPINB11Q96P15 392 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 PKMYT1Q99640 499 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 GORASP1Q9BQQ3 440 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 UQCC2Q9BRT2 126 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 CATSPERBQ9H7T0 1116 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 TMEM39AQ9NV64 488 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 MARCH5Q9NX47 278 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 HEY2Q9UBP5 337 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 MTO1Q9Y2Z2 717 aaKnown RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 CASP8AP2Q9UKL3 1982 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 OR51F1A6NGY5 319 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 PRRG1O14668 218 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 EDF1O60869 148 aaKnown RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 AP2A1O95782 977 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 MYL2P10916 166 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 GJA1P17302 382 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 PGAM1P18669 254 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 SERPINB3P29508 390 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 SEMA3BQ13214 749 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 BTG3Q14201 252 aaPredicted RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 MS4A13Q5J8X5 152 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 LINGO4Q6UY18 593 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 NLRP9Q7RTR0 991 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 ALYREFQ86V81 257 aaKnown RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 PLD6Q8N2A8 252 aaKnown RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 MCUQ8NE86 351 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 BLOC1S5Q8TDH9 187 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 EXT2Q93063 718 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 ATP6V1E2Q96A05 226 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 SLC9A7Q96T83 725 aa10.94□□□□□ -0.66
NEDD9-201ENST00000379433 RCOR3Q9P2K3 495 aaPredicted RBP10.94□□□□□ -0.66
NEDD9-201ENST00000379433 CCL5P13501 91 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 GLDCP23378 1020 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 COPAP53621 1224 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 PTPRRQ15256 657 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 CRY1Q16526 586 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 ANKRD20A4Q4UJ75 823 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 ITPRIPL1Q6GPH6 555 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 RYBPQ8N488 228 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-201ENST00000379433 OR7D4Q8NG98 312 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 OMDQ99983 421 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 CHKBQ9Y259 395 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 KCTD3Q9Y597 815 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 ACTL7BQ9Y614 415 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 DOCK6Q96HP0 2047 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 AURKAO14965 403 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 ZNF254O75437 659 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 TYMPP19971 482 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 ALDH3A1P30838 453 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 PSMD7P51665 324 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 ALDH18A1P54886 795 aaKnown RBP10.93□□□□□ -0.66
NEDD9-201ENST00000379433 GALNT2Q10471 571 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 PDE1CQ14123 709 aaPredicted RBP10.93□□□□□ -0.66
NEDD9-201ENST00000379433 GALNT3Q14435 633 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 ARHGAP12Q8IWW6 846 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 E2F7Q96AV8 911 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 ALPK1Q96QP1 1244 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 TRIM55Q9BYV6 548 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 C20orf27Q9GZN8 174 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 GBA3Q9H227 469 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 FBXO44Q9H4M3 255 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 LRRC40Q9H9A6 602 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 MRPS23Q9Y3D9 190 aaKnown RBP10.93□□□□□ -0.66
NEDD9-201ENST00000379433 SLC30A1Q9Y6M5 507 aa10.93□□□□□ -0.66
NEDD9-201ENST00000379433 ARHGEF37A1IGU5 675 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 CBX4O00257 560 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 MAFKO60675 156 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 SPAG6O75602 509 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 OAZ2O95190 189 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 CCR10P46092 362 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ARFIP2P53365 341 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 CBLBQ13191 982 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ITGA9Q13797 1035 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 FASTKD1Q53R41 847 aaKnown RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 VWA5B1Q5TIE3 1220 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 FSTL4Q6MZW2 842 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ESX1Q8N693 406 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 OR6K2Q8NGY2 324 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 PXYLP1Q8TE99 480 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 SMOC2Q9H3U7 446 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 TLR8Q9NR97 1041 aaKnown RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 PPARGC1AQ9UBK2 798 aaKnown RBP10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ZFP69BQ9UJL9 534 aa10.92□□□□□ -0.66
NEDD9-201ENST00000379433 ZNF510Q9Y2H8 683 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms