RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ARNTP27540 789 aa17.56■□□□□ 0.4
THUMPD2-201ENST00000378727 SERPINH1P50454 418 aaKnown RBP17.56■□□□□ 0.4
THUMPD2-201ENST00000378727 SHHQ15465 462 aa17.56■□□□□ 0.4
THUMPD2-201ENST00000378727 CDHR3Q6ZTQ4 885 aa17.56■□□□□ 0.4
THUMPD2-201ENST00000378727 RIN3Q8TB24 985 aa17.56■□□□□ 0.4
THUMPD2-201ENST00000378727 ZNF510Q9Y2H8 683 aa17.56■□□□□ 0.4
THUMPD2-201ENST00000378727 TYW5A2RUC4 315 aaKnown RBP17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 ALDOAP04075 364 aaKnown RBP17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 HOXA9P31269 272 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 CSKP41240 450 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 ETV4P43268 484 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 ARCN1P48444 511 aaKnown RBP17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 LINGO4Q6UY18 593 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 CPLX4Q7Z7G2 160 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 CMTM8Q8IZV2 173 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 BBS5Q8N3I7 341 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 EXOC2Q96KP1 924 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 TGS1Q96RS0 853 aaKnown RBP17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 MCMBPQ9BTE3 642 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 NOD2Q9HC29 1040 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 IARS2Q9NSE4 1012 aaKnown RBP17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 PDE4DIPQ5VU43 2346 aa17.55■□□□□ 0.4
THUMPD2-201ENST00000378727 ATG2AQ2TAZ0 1938 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 TAC1P20366 129 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 NTHL1P78549 312 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 CDH18Q13634 790 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 SEPT6Q14141 434 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 GRTP1Q5TC63 336 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 ZNF697Q5TEC3 545 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 HHATQ5VTY9 493 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 PDPK2PQ6A1A2 396 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 STRA8Q7Z7C7 330 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 SH3RF2Q8TEC5 729 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 DDI1Q8WTU0 396 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 FEM1CQ96JP0 617 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 RANBP9Q96S59 729 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 SRPK1Q96SB4 655 aaKnown RBP17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 RBBP8Q99708 897 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 MKS1Q9NXB0 559 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 CLEC4EQ9ULY5 219 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 YBX2Q9Y2T7 364 aaKnown RBP17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 LAMA3Q16787 3333 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 COPEO14579 308 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 FGF19O95750 216 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 SERPINF2P08697 491 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 HNRNPH2P55795 449 aaKnown RBP17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 CDK18Q07002 472 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 DNAJC3Q13217 504 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 CNGA3Q16281 694 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 MICALCLQ6ZW33 695 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 RNF135Q8IUD6 432 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 MFN1Q8IWA4 741 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 TRIB3Q96RU7 358 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 TASP1Q9H6P5 420 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 PCMTD2Q9NV79 361 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 PLK2Q9NYY3 685 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 TXNDC16Q9P2K2 825 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 VPS28Q9UK41 221 aa17.54■□□□□ 0.4
THUMPD2-201ENST00000378727 BPTFQ12830 3046 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 HEATR9A2RTY3 570 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 TMCC1O94876 653 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 VAPBO95292 243 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 HNRNPA1P09651 372 aaKnown RBP eCLIP17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 DHRS4L1P0CG22 281 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 DDX6P26196 483 aaKnown RBP eCLIP17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 SCNN1BP51168 640 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 ERVK-21P61565 698 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 GPM6BQ13491 265 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 PDK4Q16654 411 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 PRSS36Q5K4E3 855 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 MPP7Q5T2T1 576 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 RNF43Q68DV7 783 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 TPGS1Q6ZTW0 290 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 ADGRD2Q7Z7M1 963 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 SPOCK2Q92563 424 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 USP13Q92995 863 aaPredicted RBP17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 FAM111AQ96PZ2 611 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 PRKD2Q9BZL6 878 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 SLC13A1Q9BZW2 595 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 FGFR1OP2Q9NVK5 253 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 VPS51Q9UID3 782 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 HCFC2Q9Y5Z7 792 aa17.53■□□□□ 0.4
THUMPD2-201ENST00000378727 RANBP2P49792 3224 aaKnown RBP17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 ANKRD36A6QL64 1941 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 TPP1O14773 563 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 INSIG1O15503 277 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 EPOP01588 193 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 AVPR1AP37288 418 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 ABCG1P45844 678 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 LIMK2P53671 638 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 SLC14A2Q15849 920 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 GLIPR1L2Q4G1C9 344 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 MPPE1Q53F39 396 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 ARMC3Q5W041 872 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 RBM23Q86U06 439 aaKnown RBP17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 CNTN4Q8IWV2 1026 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 APCDD1Q8J025 514 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 NDUFAF2Q8N183 169 aa17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 ZNF707Q96C28 371 aaPredicted RBP17.52■□□□□ 0.4
THUMPD2-201ENST00000378727 IFT43Q96FT9 208 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms