RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 CDH9Q9ULB4 789 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 AP3M1Q9Y2T2 418 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 PLIN4Q96Q06 1357 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 AZIN1O14977 448 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 ASNA1O43681 348 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 GSTM1P09488 218 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 BLVRAP53004 296 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 TRAF3Q13114 568 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 MAPKAPK3Q16644 382 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 NUDT18Q6ZVK8 323 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 C10orf82Q8WW14 230 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 C18orf25Q96B23 403 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 TPD52L3Q96J77 140 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 SDCBP2Q9H190 292 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 MARCH2Q9P0N8 246 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 ATXN10Q9UBB4 475 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 FETUBQ9UGM5 382 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 BTRCQ9Y297 605 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 TRAF6Q9Y4K3 522 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 PDE4DIPQ5VU43 2346 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 MFN2O95140 757 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 ALOX12P18054 663 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 ADRA1BP35368 520 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 CAMK2GQ13555 558 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 CWF19L1Q69YN2 538 aaKnown RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 SCIMPQ6UWF3 145 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 LRRC49Q8IUZ0 686 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 TFAP2BQ92481 460 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 LENG9Q96B70 501 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 SERAC1Q96JX3 654 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 PLEKHG4BQ96PX9 1271 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 REXO4Q9GZR2 422 aaKnown RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 APOBEC3GQ9HC16 384 aaKnown RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 SPON1Q9HCB6 807 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 CACNA2D2Q9NY47 1150 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 STMN3Q9NZ72 180 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 VWA7Q9Y334 891 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 NFAT5O94916 1531 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 MLYCDO95822 493 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 PCNAP12004 261 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 ANXA11P50995 505 aaKnown RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 ALDH6A1Q02252 535 aaKnown RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 SLC35G1Q2M3R5 365 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 ARL13AQ5H913 290 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-203ENST00000375274 RFWD3Q6PCD5 774 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 C6orf89Q6UWU4 347 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 TLK2Q86UE8 772 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 CYP4Z1Q86W10 505 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 STK40Q8N2I9 435 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 CIB1Q99828 191 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 REEP1Q9H902 201 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 CNGB3Q9NQW8 809 aa11.64□□□□□ -0.55
PTCH1-203ENST00000375274 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 TMEM63AO94886 807 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 KCNH1O95259 989 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 ABCB1P08183 1280 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 FGFR1P11362 822 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 EPB42P16452 691 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 ELAVL2Q12926 359 aaKnown RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 MTA1Q13330 715 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 BOP1Q14137 746 aaKnown RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 PTPRNQ16849 979 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 FAM187BQ17R55 369 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 HSDL1Q3SXM5 330 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 TEX44Q53QW1 395 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 CDYL2Q8N8U2 506 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 SHISA4Q96DD7 197 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 MRPL45Q9BRJ2 306 aaKnown RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 NTPCRQ9BSD7 190 aaKnown RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 RAD21L1Q9H4I0 556 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 MIEF1Q9NQG6 463 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 COL20A1Q9P218 1284 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 RCOR3Q9P2K3 495 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 CLCA2Q9UQC9 943 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 RIPK3Q9Y572 518 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 PMM2O15305 246 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 FARP2O94887 1054 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 STAU1O95793 577 aaKnown RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 GRM5P41594 1212 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 PIK3CGP48736 1102 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 GDF10P55107 478 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 ARHGAP17Q68EM7 881 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 ARHGAP36Q6ZRI8 547 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 LUZP2Q86TE4 346 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 C1orf127Q8N9H9 656 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 MCOLN3Q8TDD5 553 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 HDAC10Q969S8 669 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 TEKT5Q96M29 485 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 SEMA3CQ99985 751 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 SENP6Q9GZR1 1112 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-203ENST00000375274 ADPRHL2Q9NX46 363 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 DYRK1BQ9Y463 629 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 MYPNQ86TC9 1320 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 FAM220BPB1ANY3 271 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 CLDN5O00501 218 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 TIPRLO75663 272 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 ALDH2P05091 517 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 CCNA2P20248 432 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 PEX2P28328 305 aa11.63□□□□□ -0.55
PTCH1-203ENST00000375274 SCNN1GP51170 649 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms