RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 KLHL6Q8WZ60 621 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PLEKHF1Q96S99 279 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 BARHL2Q9NY43 387 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ANKMY1Q9P2S6 941 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 FLI1Q01543 452 aaPredicted RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 VPS26BQ4G0F5 336 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ULK3Q6PHR2 472 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 BBS1Q8NFJ9 593 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CPNE3O75131 537 aaKnown RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 ANGPTL1O95841 491 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 TGFB3P10600 412 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PPP2R1BP30154 601 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 GCLMP48507 274 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 RRP1BQ14684 758 aaKnown RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 GNASQ5JWF2 1037 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 FASTKD5Q7L8L6 764 aaKnown RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 PI4K2BQ8TCG2 481 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 RFKQ969G6 155 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CHADO15335 359 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PCDH1Q08174 1060 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 ESRP1Q6NXG1 681 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 MSTO1Q9BUK6 570 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 ZBTB3Q9H5J0 574 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 CDH22Q9UJ99 828 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 IFNA6P05013 189 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 SLC2A2P11168 524 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 CDC25AP30304 524 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PTPN7P35236 360 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 DSTNP60981 165 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 CYP24A1Q07973 514 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 RC3H1Q5TC82 1133 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 NOXA1Q86UR1 476 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 RBM15BQ8NDT2 890 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 OR4A15Q8NGL6 344 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 TWNKQ96RR1 684 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 TBCBQ99426 244 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 IFT27Q9BW83 186 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 TRIM2Q9C040 744 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PTPN5P54829 565 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 MLLT6P55198 1093 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 SPATA19Q7Z5L4 167 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 ELMOD1Q8N336 334 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 FUOMA2VDF0 154 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 EME2A4GXA9 379 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 OR2AT4A6NND4 320 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 RPL3P39023 403 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 DCDC5Q6ZRR9 648 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PKP3Q9Y446 797 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 RFX7Q2KHR2 1363 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 KCNH1O95259 989 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PPIBP23284 216 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 WSCD2Q2TBF2 565 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 NADK2Q4G0N4 442 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 AKIRIN2Q53H80 203 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 OR56A4Q8NGH8 313 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 RASSF1Q9NS23 344 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 LGALS13Q9UHV8 139 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PCYT1BQ9Y5K3 369 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 MYPNQ86TC9 1320 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 AQP12BA6NM10 295 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 MITFO75030 526 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 RP2O75695 350 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 RNASEH2AO75792 299 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 CRTAMO95727 393 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 CST1P01037 141 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 AQP12AQ8IXF9 295 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PPIP5K1Q6PFW1 1433 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 SPATA31E1Q6ZUB1 1445 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PIGRP01833 764 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 C9P02748 559 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PGAM1P18669 254 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 RGS1Q08116 209 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PUS3Q9BZE2 481 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 GPHNQ9NQX3 736 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 H0YAE9 185 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 CABYRO75952 493 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 AFF1P51825 1210 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 ARF3P61204 181 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 ARF1P84077 181 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 COL28A1Q2UY09 1125 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 ZNF404Q494X3 552 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 C12orf45Q8N5I9 185 aaPredicted RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 PPP1R16BQ96T49 567 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 EXO5Q9H790 373 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 NINJ2Q9NZG7 142 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 EPHA7Q15375 998 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 FAM91A1Q658Y4 838 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 TMEM214Q6NUQ4 689 aaKnown RBP6.67□□□□□ -1.34
UBR4-204ENST00000375254 C7orf31Q8N865 590 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 TLCD1Q96CP7 247 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 COX16Q9P0S2 106 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PI4KBQ9UBF8 816 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 GPR75-ASB3A0A0A6YYF3 556 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 hCG_1642624A0A1W2PR95 340 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 SERPINA3P01011 423 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 THEGLP0DJG4 465 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 PDSS2Q86YH6 399 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 THEM5Q8N1Q8 247 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 EXOC2Q96KP1 924 aa6.67□□□□□ -1.34
UBR4-204ENST00000375254 TM9SF2Q99805 663 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 187.5 ms