RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 FAM95CA0A1B0GW59 222 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 TNFRSF10BO14763 440 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 SYN3O14994 580 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 RTN3O95197 1032 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 MAGEA11P43364 429 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 PAPOLAP51003 745 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 KPNA1P52294 538 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 TBX4P57082 545 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 DNAJB13P59910 316 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 XIAPP98170 497 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 DSC1Q08554 894 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 SMARCB1Q12824 385 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 IKBKEQ14164 716 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 POU6F1Q14863 301 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 HERC3Q15034 1050 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 FAM83EQ2M2I3 478 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 AGAP9Q5VTM2 703 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 AFMIDQ63HM1 303 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 PIWIL4Q7Z3Z4 852 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 DEFB128Q7Z7B8 93 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 PLD6Q8N2A8 252 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 CNTD1Q8N815 330 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 C2CD4AQ8NCU7 369 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 OR10T2Q8NGX3 314 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 ZSCAN18Q8TBC5 510 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 MICAL1Q8TDZ2 1067 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 STYXQ8WUJ0 223 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 WDR60Q8WVS4 1066 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 ELMO2Q96JJ3 720 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 CNDP1Q96KN2 507 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 GATA5Q9BWX5 397 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 OSBPL1AQ9BXW6 950 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 RHOBTB2Q9BYZ6 727 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 ZYG11BQ9C0D3 744 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 ZCWPW1Q9H0M4 648 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 MRPL46Q9H2W6 279 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 RETREG1Q9H6L5 497 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 SP110Q9HB58 689 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 ARNT2Q9HBZ2 717 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 MRPL40Q9NQ50 206 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 TMLHEQ9NVH6 421 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 HACD3Q9P035 362 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 SLC7A8Q9UHI5 535 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 PCDHB5Q9Y5E4 795 aa12.37□□□□□ -0.43
UBR4-203ENST00000375225 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.37□□□□□ -0.43
UBR4-203ENST00000375225 TTC3P53804 2025 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 MYO16Q9Y6X6 1858 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 RGSL1A5PLK6 1076 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 KCNU1A8MYU2 1149 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 MATN2O00339 956 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 TBX10O75333 385 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 OAZ2O95190 189 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 VAPBO95292 243 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 RBP1P09455 135 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 COX4I1P13073 169 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 ANPEPP15144 967 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 SAT1P21673 171 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 ADRA1AP35348 466 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 CPOXP36551 454 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 GRIA4P48058 902 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 MLLT6P55198 1093 aaPredicted RBP12.36□□□□□ -0.43
UBR4-203ENST00000375225 OLIG2Q13516 323 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 CUL3Q13618 768 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 SEPT6Q14141 434 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 LBRQ14739 615 aaKnown RBP12.36□□□□□ -0.43
UBR4-203ENST00000375225 MAPRE2Q15555 327 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 LRRC26Q2I0M4 334 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 PAN2Q504Q3 1202 aaKnown RBP12.36□□□□□ -0.43
UBR4-203ENST00000375225 SLC39A12Q504Y0 691 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 SH2D4BQ5SQS7 431 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 SLC22A9Q8IVM8 553 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 UMODL1-AS1Q8N2C9 162 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 BBS5Q8N3I7 341 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 ZNF781Q8N8C0 355 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 RP9Q8TA86 221 aaKnown RBP12.36□□□□□ -0.43
UBR4-203ENST00000375225 SCAMP5Q8TAC9 235 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 CASP10Q92851 521 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 ZNF184Q99676 751 aaPredicted RBP12.36□□□□□ -0.43
UBR4-203ENST00000375225 PAAF1Q9BRP4 392 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 OXCT2Q9BYC2 517 aaPredicted RBP12.36□□□□□ -0.43
UBR4-203ENST00000375225 CAB39LQ9H9S4 337 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 PRDM5Q9NQX1 630 aaPredicted RBP12.36□□□□□ -0.43
UBR4-203ENST00000375225 SCOCQ9UIL1 159 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 NEU3Q9UQ49 428 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 TET1Q8NFU7 2136 aa12.36□□□□□ -0.43
UBR4-203ENST00000375225 NLRC5Q86WI3 1866 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 A0A1W2PQH9 124 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 OR6C75A6NL08 312 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 ZNF195O14628 629 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 PMPCBO75439 489 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 MOCS2O96007 188 aaPredicted RBP12.35□□□□□ -0.43
UBR4-203ENST00000375225 AHSGP02765 367 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 HLA-DQB2P05538 268 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 ATP5F1P24539 256 aaPredicted RBP12.35□□□□□ -0.43
UBR4-203ENST00000375225 PPARGP37231 505 aaPredicted RBP12.35□□□□□ -0.43
UBR4-203ENST00000375225 SLC26A3P40879 764 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 OR1G1P47890 313 aa12.35□□□□□ -0.43
UBR4-203ENST00000375225 SERPINH1P50454 418 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms