RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 GPR62Q9BZJ7 368 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 STN1Q9H668 368 aaKnown RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 CHRAC1Q9NRG0 131 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 VPS45Q9NRW7 570 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 UBP1Q9NZI7 540 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 MARCH2Q9P0N8 246 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 LNPEPQ9UIQ6 1025 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 NUDT5Q9UKK9 219 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 VWA8A3KMH1 1905 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 IGLV3-10A0A075B6K4 115 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 SPECC1L-ADORA2AF8WAN1 911 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 TRAFD1O14545 582 aaPredicted RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 CCDC22O60826 627 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 H2AFYO75367 372 aaKnown RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 SERPINE1P05121 402 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 MYL2P10916 166 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 SLC11A1P49279 550 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 GPR15P49685 360 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 PGFP49763 221 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 ARPP19P56211 112 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 ILF2Q12905 390 aaKnown RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 OLIG2Q13516 323 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 MS4A13Q5J8X5 152 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 C10orf120Q5SQS8 335 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 FSTL4Q6MZW2 842 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 TTPALQ9BTX7 342 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 FICDQ9BVA6 458 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 KCNK13Q9HB14 408 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 IARS2Q9NSE4 1012 aaKnown RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 MARCH5Q9NX47 278 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 MPP6Q9NZW5 540 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 SLC4A7Q9Y6M7 1214 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 TBC1D4O60343 1298 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 PROCP04070 461 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 HLA-DQB2P05538 268 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 TPH1P17752 444 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 PTPN4P29074 926 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 ADRA1AP35348 466 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 YBEYP58557 167 aaPredicted RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 KCNJ2P63252 427 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 TAF10Q12962 218 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 TBCCQ15814 346 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 CCDC6Q16204 474 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 LRRC43Q8N309 656 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 DNAJC9Q8WXX5 260 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 SKA1Q96BD8 255 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 NSL1Q96IY1 281 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 SEPT5Q99719 369 aaPredicted RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 CENPKQ9BS16 269 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 RHOJQ9H4E5 214 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 SP110Q9HB58 689 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 SLC17A6Q9P2U8 582 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 TLK1Q9UKI8 766 aa8.31□□□□□ -1.08
UBR4-202ENST00000375224 RPL26L1Q9UNX3 145 aaKnown RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 HBS1LQ9Y450 684 aaKnown RBP8.31□□□□□ -1.08
UBR4-202ENST00000375224 DRGXA6NNA5 263 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 GALTP07902 379 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 MSL3P1P0C860 447 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 S100A1P23297 94 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 TARSP26639 723 aaKnown RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 NMBRP28336 390 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 MAPKAPK2P49137 400 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 TUFMP49411 452 aaKnown RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 TMED10P49755 219 aaKnown RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 PRKAA2P54646 552 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 TNK2Q07912 1038 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 PARP15Q460N3 678 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 MARC1Q5VT66 337 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 IRGCQ6NXR0 463 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 ARID3BQ8IVW6 561 aaPredicted RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 CNTN4Q8IWV2 1026 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 ZNF683Q8IZ20 524 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 PDZD8Q8NEN9 1154 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 SPATA22Q8NHS9 363 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 SLC7A5P2Q9GIP4 190 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 ARNT2Q9HBZ2 717 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 PDP2Q9P2J9 529 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 COPG2Q9UBF2 871 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 HAO1Q9UJM8 370 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 SORCS3Q9UPU3 1222 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 TCAF1Q9Y4C2 921 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 FNDC1Q4ZHG4 1894 aaPredicted RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 TTC3P53804 2025 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 DOCK4Q8N1I0 1966 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 A0A096LPK6 155 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 CCDC195A0A1B0GUA6 201 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 SLC12A8A0AV02 714 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 TBKBP1A7MCY6 615 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 IGLV3-27P01718 113 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 HSPA8P11142 646 aaKnown RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 COL6A2P12110 1019 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 CPA3P15088 417 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 CALB2P22676 271 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 ADARP55265 1226 aaKnown RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 THOC5Q13769 683 aaKnown RBP8.3□□□□□ -1.08
UBR4-202ENST00000375224 ARTNQ5T4W7 220 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 MBLAC2Q68D91 279 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 C16orf46Q6P387 395 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 RANBP10Q6VN20 620 aa8.3□□□□□ -1.08
UBR4-202ENST00000375224 SCUBE1Q8IWY4 988 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms