RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 TTC33Q6PID6 262 aaPredicted RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 FASTKD5Q7L8L6 764 aaKnown RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 ZDHHC17Q8IUH5 632 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 SLC2A14Q8TDB8 520 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 ZMAT2Q96NC0 199 aaKnown RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 UNC93B1Q9H1C4 597 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 FAIMQ9NVQ4 179 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 SUCOQ9UBS9 1254 aaKnown RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 MID2Q9UJV3 735 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 ACOT9Q9Y305 439 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 SLCO1B7G3V0H7 640 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 APOA4P06727 396 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 NFKB1P19838 968 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 ADSLP30566 484 aaPredicted RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 MATKP42679 507 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 NDUFV1P49821 464 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 POU5F1BQ06416 359 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 SLC12A1Q13621 1099 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 LRP8Q14114 963 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 TMEM214Q6NUQ4 689 aaKnown RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 PNPLA1Q8N8W4 532 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 PPP1R13LQ8WUF5 828 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 GFM2Q969S9 779 aaKnown RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 GPR22Q99680 433 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 CASS4Q9NQ75 786 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 TRNAU1APQ9NX07 287 aaKnown RBP13.84□□□□□ -0.19
USP49-201ENST00000373006 SCN1AP35498 2009 aa13.84□□□□□ -0.19
USP49-201ENST00000373006 PSMD12O00232 456 aaPredicted RBP13.83□□□□□ -0.19
USP49-201ENST00000373006 PGK1P00558 417 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 ERCC2P18074 760 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 SOX11P35716 441 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 CLCN2P51788 898 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 NME5P56597 212 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 NUP107P57740 925 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 C1QTNF8P60827 252 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 ESRRGP62508 458 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 ADIGQ0VDE8 80 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 BST2Q10589 180 aaKnown RBP13.83□□□□□ -0.19
USP49-201ENST00000373006 ZBTB17Q13105 803 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 STX5Q13190 355 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 XKR5Q6UX68 686 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 CBR4Q8N4T8 237 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 TXNDC5Q8NBS9 432 aaKnown RBP13.83□□□□□ -0.19
USP49-201ENST00000373006 CHST13Q8NET6 341 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 SPPL2BQ8TCT7 592 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 BIRC8Q96P09 236 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 POMKQ9H5K3 350 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 SETD4Q9NVD3 440 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 SLC8A2Q9UPR5 921 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 SQORQ9Y6N5 450 aa13.83□□□□□ -0.19
USP49-201ENST00000373006 TARM1B6A8C7 271 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 ATE1O95260 518 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 TSPAN8P19075 237 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 SLC7A1P30825 629 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 HALP42357 657 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 EIF2B2P49770 351 aaKnown RBP13.83□□□□□ -0.2
USP49-201ENST00000373006 CSE1LP55060 971 aaKnown RBP13.83□□□□□ -0.2
USP49-201ENST00000373006 SLC25A52Q3SY17 297 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 Q6ZNX1 250 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 STRADAQ7RTN6 431 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 GPR180Q86V85 440 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 MFSD6LQ8IWD5 586 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 ANKRD52Q8NB46 1076 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 USP33Q8TEY7 942 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 SPAG4Q9NPE6 437 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 MRPL42Q9Y6G3 142 aaKnown RBP13.83□□□□□ -0.2
USP49-201ENST00000373006 RLFQ13129 1914 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 TRIM24O15164 1050 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 UBDO15205 165 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 GPC4O75487 556 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 TGFB3P10600 412 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 INSRRP14616 1297 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 SLC7A2P52569 658 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 OXCT1P55809 520 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 C6orf10Q5SRN2 563 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 CELF3Q5SZQ8 465 aaKnown RBP13.83□□□□□ -0.2
USP49-201ENST00000373006 GPR107Q5VW38 600 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 OGFOD2Q6N063 350 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 KDELC2Q7Z4H8 507 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 FBXO16Q8IX29 292 aaPredicted RBP13.83□□□□□ -0.2
USP49-201ENST00000373006 RDH11Q8TC12 318 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 LRCH3Q96II8 777 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 ANKRD60Q9BZ19 345 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 OSBPL2Q9H1P3 480 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 CHST12Q9NRB3 414 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 PIGVQ9NUD9 493 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 SMOXQ9NWM0 555 aa13.83□□□□□ -0.2
USP49-201ENST00000373006 GIPC1O14908 333 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 E2F6O75461 281 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 YWHAQP27348 245 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 GJA9P57773 515 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 CHST15Q7LFX5 561 aaPredicted RBP13.82□□□□□ -0.2
USP49-201ENST00000373006 DHFR2Q86XF0 187 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 NPWQ8N729 165 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 TFAP2CQ92754 450 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 MCMBPQ9BTE3 642 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 RHOJQ9H4E5 214 aa13.82□□□□□ -0.2
USP49-201ENST00000373006 FBRSL1Q9HCM7 1045 aaKnown RBP13.82□□□□□ -0.2
USP49-201ENST00000373006 UTP6Q9NYH9 597 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms