RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 LRRC40Q9H9A6 602 aa11.34□□□□□ -0.59
SYNPO2L-201ENST00000372873 GPD1P21695 349 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 CD300CQ08708 224 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 TRAP1Q12931 704 aaKnown RBP11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 E2F2Q14209 437 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 PON2Q15165 354 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 SLC27A3Q5K4L6 730 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 PDZK1Q5T2W1 519 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 FKBP9P1Q75LS8 142 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 ZNF276Q8N554 614 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 DCAF4Q8WV16 495 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 EMILIN2Q9BXX0 1053 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 CLEC4MQ9H2X3 399 aaPredicted RBP11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 SLC27A5Q9Y2P5 690 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 NUMBLQ9Y6R0 609 aa11.33□□□□□ -0.59
SYNPO2L-201ENST00000372873 PABPN1LA6NDY0 278 aaKnown RBP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 EFCAB10A6NFE3 127 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 NUAK1O60285 661 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 TADA2AO75478 443 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 HNRNPLP14866 589 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 MTMR1Q13613 665 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 KLHL12Q53G59 568 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 RFPL4BQ6ZWI9 263 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 IGDCC3Q8IVU1 814 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 MCPH1Q8NEM0 835 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 ITFG1Q8TB96 612 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 URGCPQ8TCY9 931 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZNF384Q8TF68 577 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 PIK3R3Q92569 461 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 HDAC10Q969S8 669 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 CPNE1Q99829 537 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 INO80BQ9C086 356 aaPredicted RBP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 MTMR12Q9C0I1 747 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 RIBC2Q9H4K1 309 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 SMOXQ9NWM0 555 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 PCDHA11Q9Y5I1 949 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 SESN1Q9Y6P5 492 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 C5P01031 1676 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 TMEM191CA6NGB0 347 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 I3L521 148 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 HUS1O60921 280 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 RAD17O75943 681 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 YES1P07947 543 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 PAMP19021 973 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 TXNL4AP83876 142 aaKnown RBP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 SQLEQ14534 574 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 ARHGEF16Q5VV41 709 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 TBC1D21Q8IYX1 336 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 SMG8Q8ND04 991 aaKnown RBP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 CTRCQ99895 268 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 MRPL9Q9BYD2 267 aaKnown RBP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 CAB39LQ9H9S4 337 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 ATPIF1Q9UII2 106 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 MYH2Q9UKX2 1941 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 GAKO14976 1311 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 C12orf71A8MTZ7 269 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 CHRNGP07510 517 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 MMP10P09238 476 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 DHRS4L1P0CG22 281 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 HLA-DPA1P20036 260 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 KLF1Q13351 362 aaPredicted RBP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 DUOXA2Q1HG44 320 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 RC3H1Q5TC82 1133 aaKnown RBP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 NEPROQ6NW34 567 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 PGM2L1Q6PCE3 622 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 KDELC2Q7Z4H8 507 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 LUZP2Q86TE4 346 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 COLGALT1Q8NBJ5 622 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 B3GALT6Q96L58 329 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 FKBP14Q9NWM8 211 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 RAPGEFL1Q9UHV5 662 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 IPO11Q9UI26 975 aaKnown RBP11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 C3orf18Q9UK00 162 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZNRF3Q9ULT6 936 aa11.33□□□□□ -0.6
SYNPO2L-201ENST00000372873 CNTNAP4Q9C0A0 1308 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 KMOO15229 486 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 CYP7B1O75881 506 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 SLC26A3P40879 764 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 MPP1Q00013 466 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 EPS8Q12929 822 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 ORC1Q13415 861 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 APOFQ13790 326 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 CSHL1Q14406 222 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 SEZ6Q53EL9 994 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 SNAP47Q5SQN1 464 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 RAP1GAP2Q684P5 730 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 ZNF773Q6PK81 442 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 EID3Q8N140 333 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 LEMD2Q8NC56 503 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 OR6P1Q8NGX9 317 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 KCTD4Q8WVF5 259 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 RMDN3Q96TC7 470 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 NPLQ9BXD5 320 aaPredicted RBP11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 C8orf4Q9NR00 106 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 RIMS3Q9UJD0 308 aa11.32□□□□□ -0.6
SYNPO2L-201ENST00000372873 CDH9Q9ULB4 789 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms