RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 STAT1P42224 750 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 ABCG1P45844 678 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 GSCP56915 257 aaPredicted RBP13.35□□□□□ -0.27
RPF1-201ENST00000370654 PFN3P60673 137 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 PDE1CQ14123 709 aaPredicted RBP13.35□□□□□ -0.27
RPF1-201ENST00000370654 ACAP1Q15027 740 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 POLD3Q15054 466 aaPredicted RBP13.35□□□□□ -0.27
RPF1-201ENST00000370654 ARL13BQ3SXY8 428 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 CACTIN-AS1Q8N1I8 211 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 CENPTQ96BT3 561 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 HMCESQ96FZ2 354 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 LENG8Q96PV6 779 aaPredicted RBP13.35□□□□□ -0.27
RPF1-201ENST00000370654 SELENOOQ9BVL4 669 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 PRORYQ9H606 182 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 TMEM51Q9NW97 253 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 TAS2R14Q9NYV8 317 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 NLGN3Q9NZ94 848 aa13.35□□□□□ -0.27
RPF1-201ENST00000370654 LIMA1Q9UHB6 759 aaKnown RBP13.35□□□□□ -0.27
RPF1-201ENST00000370654 PMS2P1A4D2B8 440 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 SIGLEC16A6NMB1 481 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 TSPAN6O43657 245 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 BUB1O43683 1085 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 GCATO75600 419 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 MPOP05164 745 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 CELA2BP08218 269 aaPredicted RBP13.34□□□□□ -0.27
RPF1-201ENST00000370654 TIMP2P16035 220 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 NSFP46459 744 aaKnown RBP13.34□□□□□ -0.27
RPF1-201ENST00000370654 E2F1Q01094 437 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 C1orf61Q13536 156 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 NCAPHQ15003 741 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 CYTH1Q15438 398 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 CDKN3Q16667 212 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 DEFB133Q30KQ1 61 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 PPP1R15BQ5SWA1 713 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 SCYL2Q6P3W7 929 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 CRTC1Q6UUV9 634 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 GDPD4Q6W3E5 623 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 TRIM72Q6ZMU5 477 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 SLFN11Q7Z7L1 901 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 VPS36Q86VN1 386 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 RTL3Q8N8U3 475 aaKnown RBP13.34□□□□□ -0.27
RPF1-201ENST00000370654 FAM181AQ8N9Y4 354 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 C3orf20Q8ND61 904 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 SNIP1Q8TAD8 396 aaKnown RBP13.34□□□□□ -0.27
RPF1-201ENST00000370654 NTAN1Q96AB6 310 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 IFT43Q96FT9 208 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 EXOC2Q96KP1 924 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 AGPAT1Q99943 283 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 GPATCH2LQ9NWQ4 482 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 LHX3Q9UBR4 397 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 FZD10Q9ULW2 581 aa13.34□□□□□ -0.27
RPF1-201ENST00000370654 LGALS16A8MUM7 142 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 RASA4BC9J798 803 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 FPGTO14772 594 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 RASA4O43374 803 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 CREB3O43889 395 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 PIGNO95427 931 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 POP4O95707 220 aaKnown RBP13.33□□□□□ -0.27
RPF1-201ENST00000370654 JUNDP17535 347 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 TGM2P21980 687 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 EPHB2P29323 1055 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 RABIFP47224 123 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 SNRPD1P62314 119 aaKnown RBP13.33□□□□□ -0.27
RPF1-201ENST00000370654 CCDC173Q0VFZ6 552 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 SGCGQ13326 291 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 PERM1Q5SV97 790 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 FKBP15Q5T1M5 1219 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 KCTD16Q68DU8 428 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 GUSBP11Q6P575 273 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 TTC7BQ86TV6 843 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 PARGQ86W56 976 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 ARFGAP1Q8N6T3 406 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 IFI44Q8TCB0 444 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 LMX1AQ8TE12 382 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 FGF11Q92914 225 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 FUBP1Q96AE4 644 aaKnown RBP13.33□□□□□ -0.27
RPF1-201ENST00000370654 NAF1Q96HR8 494 aaKnown RBP13.33□□□□□ -0.27
RPF1-201ENST00000370654 PCMTD1Q96MG8 357 aaPredicted RBP13.33□□□□□ -0.27
RPF1-201ENST00000370654 MCEEQ96PE7 176 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 WRAP53Q9BUR4 548 aaKnown RBP13.33□□□□□ -0.27
RPF1-201ENST00000370654 TTYH3Q9C0H2 523 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 SEPT11Q9NVA2 429 aaKnown RBP13.33□□□□□ -0.27
RPF1-201ENST00000370654 COQ6Q9Y2Z9 468 aa13.33□□□□□ -0.27
RPF1-201ENST00000370654 PTPRQQ9UMZ3 2332 aa13.33□□□□□ -0.28
RPF1-201ENST00000370654 SHROOM3Q8TF72 1996 aa13.33□□□□□ -0.28
RPF1-201ENST00000370654 CXorf51AA0A1B0GTR3 108 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 CPED1A4D0V7 1026 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 J3KR12 359 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 NEMP1O14524 444 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 AQP9O43315 295 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 CSO75390 466 aaKnown RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 PRKCGP05129 697 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 ATP1A3P13637 1013 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 ETFBP38117 255 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 ZNF143P52747 638 aaPredicted RBP13.32□□□□□ -0.28
RPF1-201ENST00000370654 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.28
RPF1-201ENST00000370654 UBXN1Q04323 297 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 SERINC3Q13530 473 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 TCEA2Q15560 299 aa13.32□□□□□ -0.28
RPF1-201ENST00000370654 CA9Q16790 459 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms