RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 FBXL13Q8NEE6 735 aa14.9□□□□□ -0.02
VAMP4-202ENST00000367740 TFAP2BQ92481 460 aa14.9□□□□□ -0.02
VAMP4-202ENST00000367740 FAM149B1Q96BN6 582 aa14.9□□□□□ -0.02
VAMP4-202ENST00000367740 RPRD1AQ96P16 312 aaPredicted RBP14.9□□□□□ -0.02
VAMP4-202ENST00000367740 TAAR9Q96RI9 348 aa14.9□□□□□ -0.02
VAMP4-202ENST00000367740 ZSWIM1Q9BR11 485 aa14.9□□□□□ -0.02
VAMP4-202ENST00000367740 EDEM3Q9BZQ6 932 aa14.9□□□□□ -0.02
VAMP4-202ENST00000367740 RAB20Q9NX57 234 aa14.9□□□□□ -0.02
VAMP4-202ENST00000367740 M0QYV0 167 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 TSPAN6O43657 245 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 ZNF821O75541 412 aaPredicted RBP14.89□□□□□ -0.03
VAMP4-202ENST00000367740 FGF3P11487 239 aaPredicted RBP14.89□□□□□ -0.03
VAMP4-202ENST00000367740 KRT13P13646 458 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 GLB1P16278 677 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 MXI1P50539 228 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 BLKP51451 505 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 ENPEPQ07075 957 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 CUL2Q13617 745 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 DEFB109BQ30KR1 87 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 MAP9Q49MG5 647 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 LINGO4Q6UY18 593 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 NYAP1Q6ZVC0 841 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 VPS36Q86VN1 386 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 HID1Q8IV36 788 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 SPNS2Q8IVW8 549 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 SFTPA2Q8IWL1 248 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 FAM186BQ8IYM0 893 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 UBR7Q8N806 425 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 TEX19Q8NA77 164 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 RCBTB1Q8NDN9 531 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 HSFY1Q96LI6 401 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 MUC3BQ9H195 1237 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 RDH14Q9HBH5 336 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 AKAP7Q9P0M2 348 aaPredicted RBP14.89□□□□□ -0.03
VAMP4-202ENST00000367740 TRAF3IP3Q9Y228 551 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 TBC1D30Q9Y2I9 924 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 B3GALT1Q9Y5Z6 326 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 ANKRD36A6QL64 1941 aa14.89□□□□□ -0.03
VAMP4-202ENST00000367740 EFCAB7A8K855 629 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 CAPN5O15484 640 aaPredicted RBP14.88□□□□□ -0.03
VAMP4-202ENST00000367740 RAD1O60671 282 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 ENDOD1O94919 500 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 TRUB2O95900 331 aaKnown RBP14.88□□□□□ -0.03
VAMP4-202ENST00000367740 CTSEP14091 401 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 PNLIPP16233 465 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 NR2F2P24468 414 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 GTF2H1P32780 548 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 NASPP49321 788 aaPredicted RBP14.88□□□□□ -0.03
VAMP4-202ENST00000367740 KRT83P78385 493 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 ALG11Q2TAA5 492 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 C1QL3Q5VWW1 255 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 SHC4Q6S5L8 630 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 BEND5Q7L4P6 421 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 GKN2Q86XP6 184 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 GRAMD1CQ8IYS0 662 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 TSACCQ96A04 125 aaPredicted RBP14.88□□□□□ -0.03
VAMP4-202ENST00000367740 C2orf49Q9BVC5 232 aaPredicted RBP14.88□□□□□ -0.03
VAMP4-202ENST00000367740 PRDM8Q9NQV8 689 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 MBNL1Q9NR56 388 aaKnown RBP14.88□□□□□ -0.03
VAMP4-202ENST00000367740 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.88□□□□□ -0.03
VAMP4-202ENST00000367740 VANGL2Q9ULK5 521 aa14.88□□□□□ -0.03
VAMP4-202ENST00000367740 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.88□□□□□ -0.03
VAMP4-202ENST00000367740 WIPF3A6NGB9 483 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 HGSO14964 777 aaPredicted RBP14.87□□□□□ -0.03
VAMP4-202ENST00000367740 POLR2DO15514 142 aaKnown RBP14.87□□□□□ -0.03
VAMP4-202ENST00000367740 CALUO43852 315 aaPredicted RBP14.87□□□□□ -0.03
VAMP4-202ENST00000367740 CLDN11O75508 207 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 DDAH2O95865 285 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 GGCXP38435 758 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 MCCD1P59942 119 aaPredicted RBP14.87□□□□□ -0.03
VAMP4-202ENST00000367740 AUHQ13825 339 aaKnown RBP14.87□□□□□ -0.03
VAMP4-202ENST00000367740 SEPT6Q14141 434 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 ATP1A1-AS1Q5TC04 95 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 FAM114A1Q8IWE2 563 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 EFCAB3Q8N7B9 438 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 TP53I13Q8NBR0 393 aaPredicted RBP14.87□□□□□ -0.03
VAMP4-202ENST00000367740 GPN2Q9H9Y4 310 aaPredicted RBP14.87□□□□□ -0.03
VAMP4-202ENST00000367740 EXOC1Q9NV70 894 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 KIAA1257Q9ULG3 409 aa14.87□□□□□ -0.03
VAMP4-202ENST00000367740 ARHGEF17Q96PE2 2063 aaPredicted RBP14.87□□□□□ -0.03
VAMP4-202ENST00000367740 TNRC6AQ8NDV7 1962 aaKnown RBP14.86□□□□□ -0.03
VAMP4-202ENST00000367740 NEMP1O14524 444 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 TOR1BO14657 336 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 CPNE6O95741 557 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 GRNP28799 593 aaKnown RBP14.86□□□□□ -0.03
VAMP4-202ENST00000367740 CCNHP51946 323 aaPredicted RBP14.86□□□□□ -0.03
VAMP4-202ENST00000367740 B4GALNT1Q00973 533 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 RABEP1Q15276 862 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 NFIL3Q16649 462 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 KCTD16Q68DU8 428 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 TCTN3Q6NUS6 607 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 DCAF4L2Q8NA75 395 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 LINC00301Q8NCQ3 95 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 CPT1CQ8TCG5 803 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 ART4Q93070 314 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 HEPHQ9BQS7 1158 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 NUDT22Q9BRQ3 303 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 DDA1Q9BW61 102 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 LRIT1Q9P2V4 623 aa14.86□□□□□ -0.03
VAMP4-202ENST00000367740 SLC12A6Q9UHW9 1150 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms