RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 TICAM1Q8IUC6 712 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 RYBPQ8N488 228 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 PQLC3Q8N755 202 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 COLGALT1Q8NBJ5 622 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 TCF12Q99081 682 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 NTPCRQ9BSD7 190 aaKnown RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 OSBPL10Q9BXB5 764 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 PLAC1Q9HBJ0 212 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 COL11A2P13942 1736 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 PRORSD1PA6NEY8 169 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 MRASO14807 208 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 LYPLA2O95372 231 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 ALDH2P05091 517 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 KCNA2P16389 499 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 TUBA4AP68366 448 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 FASTKQ14296 549 aaKnown RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 GJC2Q5T442 439 aaPredicted RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 CLEC4CQ8WTT0 213 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 RNF34Q969K3 372 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 TMEM176AQ96HP8 235 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 CEP295NLQ96MC4 621 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 CNPY3Q9BT09 278 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 ELOVL4Q9GZR5 314 aa12.84□□□□□ -0.35
VAMP1-201ENST00000361716 RUVBL2Q9Y230 463 aaKnown RBP12.84□□□□□ -0.35
VAMP1-201ENST00000361716 M0R3G1 203 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 NFKBIEO00221 500 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 ZNF195O14628 629 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 SRP72O76094 671 aaKnown RBP12.83□□□□□ -0.36
VAMP1-201ENST00000361716 LSM8O95777 96 aaKnown RBP12.83□□□□□ -0.36
VAMP1-201ENST00000361716 LRPAP1P30533 357 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 TRPC1P48995 793 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 PRKAA2P54646 552 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 CAPRIN1Q14444 709 aaKnown RBP12.83□□□□□ -0.36
VAMP1-201ENST00000361716 ZNF460Q14592 562 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 PHKG1Q16816 387 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 HABP4Q5JVS0 413 aaKnown RBP12.83□□□□□ -0.36
VAMP1-201ENST00000361716 ABRAXAS1Q6UWZ7 409 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 ADCK1Q86TW2 530 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 PIGZQ86VD9 579 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 CAMK1DQ8IU85 385 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 PCDH19Q8TAB3 1148 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 CALML6Q8TD86 181 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 GLMNQ92990 594 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 FAM49AQ9H0Q0 323 aaPredicted RBP12.83□□□□□ -0.36
VAMP1-201ENST00000361716 MUC3BQ9H195 1237 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 CNGB3Q9NQW8 809 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 SYBUQ9NX95 663 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 PNMA8BQ9ULN7 279 aaPredicted RBP12.83□□□□□ -0.36
VAMP1-201ENST00000361716 GABBR2O75899 941 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 RGS20O76081 388 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 IDUAP35475 653 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 COPZ1P61923 177 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 DGCR6Q14129 220 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 UBE2UQ5VVX9 321 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 JADE1Q6IE81 842 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 CCDC81Q6ZN84 652 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 SLCO6A1Q86UG4 719 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 WDR49Q8IV35 697 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 SDCBP2Q9H190 292 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 KLQ9UEF7 1012 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 SPO11Q9Y5K1 396 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 CPQQ9Y646 472 aa12.83□□□□□ -0.36
VAMP1-201ENST00000361716 LACTBL1A8MY62 500 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 CLPXO76031 633 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 VTNP04004 478 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 HPCAL1P37235 193 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 RHDQ02161 417 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 USP10Q14694 798 aaKnown RBP12.82□□□□□ -0.36
VAMP1-201ENST00000361716 HMBOX1Q6NT76 420 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 C15orf39Q6ZRI6 1047 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 FAM35AQ86V20 835 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 OR52K1Q8NGK4 314 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 FNIP1Q8TF40 1166 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 COPS5Q92905 334 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 KCNN1Q92952 543 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 CDHR1Q96JP9 859 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 ACE2Q9BYF1 805 aaPredicted RBP12.82□□□□□ -0.36
VAMP1-201ENST00000361716 ACAD9Q9H845 621 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 PARVBQ9HBI1 364 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 TRIM39Q9HCM9 518 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 FAM47E-STBD1D6RA91 191 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 C2P06681 752 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 PCNAP12004 261 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 GOT1P17174 413 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 PSMB4P28070 264 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 PLIN5Q00G26 463 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 RSBN1Q5VWQ0 802 aaPredicted RBP12.82□□□□□ -0.36
VAMP1-201ENST00000361716 CRTC3Q6UUV7 619 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 SLC22A16Q86VW1 577 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 CCDC103Q8IW40 242 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 PNPLA1Q8N8W4 532 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 SGCDQ92629 289 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 GPRASP2Q96D09 838 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 ZFYVE19Q96K21 471 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 IFT80Q9P2H3 777 aaPredicted RBP12.82□□□□□ -0.36
VAMP1-201ENST00000361716 FOCADQ5VW36 1801 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 CLDN25C9JDP6 229 aa12.82□□□□□ -0.36
VAMP1-201ENST00000361716 NR5A2O00482 541 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms