RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 MYH3P11055 1940 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 YBX3P16989 372 aaKnown RBP eCLIP16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 FSTL4Q6MZW2 842 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 PTGR2Q8N8N7 351 aaPredicted RBP16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 MCFD2Q8NI22 146 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 SF3B1O75533 1304 aaKnown RBP eCLIP16.12■□□□□ 0.175e-6■■■■■ 119.9
CLSTN1-201ENST00000361311 LRRC37A3O60309 1634 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 RGL2O15211 777 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 CHRNGP07510 517 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 NFICP08651 508 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 SLC2A4P14672 509 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 SLC7A1P30825 629 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 CCR1P32246 355 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 CDH13P55290 713 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 LRRC74AQ0VAA2 488 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 LEMD2Q8NC56 503 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 UBASH3BQ8TF42 649 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 OLFM1Q99784 485 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 DPY30Q9C005 99 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 SENP6Q9GZR1 1112 aaPredicted RBP16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 AP5M1Q9H0R1 490 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 HIPK3Q9H422 1215 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 NUDT5Q9UKK9 219 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 SH3BP1Q9Y3L3 701 aa16.12■□□□□ 0.17
CLSTN1-201ENST00000361311 CPB1P15086 417 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CERCAMQ5T4B2 595 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CDHR3Q6ZTQ4 885 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 THAP5Q7Z6K1 395 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CHST13Q8NET6 341 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 RAB2BQ8WUD1 216 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 SPATA17Q96L03 361 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 TMEM245Q9H330 911 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 PRDM16Q9HAZ2 1276 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 POPDC2Q9HBU9 364 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 NT5MQ9NPB1 228 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 PCDH12Q9NPG4 1184 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 SEMA4BQ9NPR2 832 aaPredicted RBP16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CRYL1Q9Y2S2 319 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 IL1R2P27930 398 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 GRIK1P39086 918 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 SEPHS1P49903 392 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CCNYL2Q5T2Q4 361 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 REP15Q6BDI9 236 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 FAM45BPQ6NSW5 357 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 DDX43Q9NXZ2 648 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 SLC17A6Q9P2U8 582 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 TJP2Q9UDY2 1190 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 FBXO5Q9UKT4 447 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 A0A1W2PPW3 197 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 TOP3BO95985 862 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 MAP3K7CLP57077 242 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 ADAM17P78536 824 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CCNIQ14094 377 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 IGDCC3Q8IVU1 814 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CLYBLQ8N0X4 340 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 METTL6Q8TCB7 284 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 SLC2A14Q8TDB8 520 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 UTP15Q8TED0 518 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 HERPUD2Q9BSE4 406 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 RMND5AQ9H871 391 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 WWOXQ9NZC7 414 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 VPS9D1Q9Y2B5 631 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 PLA2G6O60733 806 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CAPN1P07384 714 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 TFPTP0C1Z6 253 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 TKTP29401 623 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 IFNA8P32881 189 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 MERTKQ12866 999 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CAPSQ13938 189 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 CCDC142Q17RM4 750 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 PITRM1Q5JRX3 1037 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 KLHL35Q6PF15 583 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 ZYG11AQ6WRX3 759 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 ZNF540Q8NDQ6 660 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 DDX1Q92499 740 aaKnown RBP16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 ENTPD7Q9NQZ7 604 aa16.11■□□□□ 0.17
CLSTN1-201ENST00000361311 KDM3BQ7LBC6 1761 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 BBIP1A8MTZ0 92 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 CCNE2O96020 404 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 PCSK1P29120 753 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 DLG2Q15700 870 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 CEP78Q5JTW2 689 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 ADGRF2Q8IZF7 708 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 C12orf29Q8N999 325 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 FBXO27Q8NI29 283 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 ASB9Q96DX5 294 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 EHD3Q9NZN3 535 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 KLHL3Q9UH77 587 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 BTRCQ9Y297 605 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 BAZ2AQ9UIF9 1905 aaKnown RBP16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 CST1P01037 141 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 RAB14P61106 215 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 TUBA4AP68366 448 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 FBXO47Q5MNV8 452 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 EDEM1Q92611 657 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 CSPG4P5Q96PW8 444 aa16.1■□□□□ 0.17
CLSTN1-201ENST00000361311 STMN3Q9NZ72 180 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms