RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 SLC39A10Q9ULF5 831 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 ZCWPW2A0A1B0GU75 182 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 MRASO14807 208 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 DLX3O60479 287 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 NR3C2P08235 984 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 SDC4P31431 198 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 HLCSP50747 726 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 MPP1Q00013 466 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 ZPBP2Q6X784 338 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 CCNYL1Q8N7R7 359 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 PDPRQ8NCN5 879 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 BPIFB6Q8NFQ5 453 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 OR52K1Q8NGK4 314 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 UPF1Q92900 1129 aaKnown RBP eCLIP18.3■□□□□ 0.529e-17■■■■■ 91.2
PTPA-206ENST00000358994 KHSRPQ92945 711 aaKnown RBP eCLIP18.3■□□□□ 0.52
PTPA-206ENST00000358994 VPS39Q96JC1 886 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 ZNF347Q96SE7 839 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 HERC2P3Q9BVR0 1158 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 DNAI2Q9GZS0 605 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 FANCEQ9HB96 536 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 GBA2Q9HCG7 927 aaPredicted RBP18.3■□□□□ 0.52
PTPA-206ENST00000358994 MAP3K20Q9NYL2 800 aaKnown RBP18.3■□□□□ 0.52
PTPA-206ENST00000358994 SIX4Q9UIU6 781 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 PSME2Q9UL46 239 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 TARM1B6A8C7 271 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 RNF103O00237 685 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 OGTO15294 1046 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 PHGDHO43175 533 aaKnown RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 JRKO75564 520 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 DDHD2O94830 711 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 TNNC2P02585 160 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 SAT1P21673 171 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 PRKAA2P54646 552 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 OSTNP61366 133 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 PLCL1Q15111 1095 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 DPYSL2Q16555 572 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 HSDL1Q3SXM5 330 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 CMTR2Q8IYT2 770 aaKnown RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 FSTL5Q8N475 847 aaPredicted RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 ABHD11Q8NFV4 315 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 CXorf38Q8TB03 319 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 SPPL2BQ8TCT7 592 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 STYXQ8WUJ0 223 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 EFHD2Q96C19 240 aaPredicted RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 CSPG4P5Q96PW8 444 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 IFT80Q9P2H3 777 aaPredicted RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 FIS1Q9Y3D6 152 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 NOX1Q9Y5S8 564 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 THSD7AQ9UPZ6 1657 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 TRPC5OSA6NMA1 111 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 ZNF487B1APH4 448 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 EI24O14681 340 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 MSCO60682 206 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 SEC14L2O76054 403 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 HSPA8P11142 646 aaKnown RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 HPCAL1P37235 193 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 CSRP3P50461 194 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 MAPRE2Q15555 327 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 CYBRD1Q53TN4 286 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 PIGZQ86VD9 579 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 KCTD4Q8WVF5 259 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 SH3YL1Q96HL8 342 aaPredicted RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 NSMCE3Q96MG7 304 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 C9orf16Q9BUW7 83 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 SEZ6LQ9BYH1 1024 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 GPN2Q9H9Y4 310 aaPredicted RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 SIAEQ9HAT2 523 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 DNMT3BQ9UBC3 853 aaKnown RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 RUVBL2Q9Y230 463 aaKnown RBP18.29■□□□□ 0.52
PTPA-206ENST00000358994 TRAF6Q9Y4K3 522 aa18.29■□□□□ 0.52
PTPA-206ENST00000358994 B4GAT1O43505 415 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 NDUFB5O43674 189 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 USP12O75317 370 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 SRP72O76094 671 aaKnown RBP18.28■□□□□ 0.52
PTPA-206ENST00000358994 RASAL1O95294 804 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 LRPAP1P30533 357 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 CAPGP40121 348 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 PTPN9P43378 593 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 CCT8P50990 548 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 GRM3Q14832 879 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 PPP1R3AQ16821 1122 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 MAP1SQ66K74 1059 aaPredicted RBP18.28■□□□□ 0.52
PTPA-206ENST00000358994 FAM45BPQ6NSW5 357 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 GADL1Q6ZQY3 521 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 FRA10AC1Q70Z53 315 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 SPRED1Q7Z699 444 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 CDAN1Q8IWY9 1227 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 ANKRD13AQ8IZ07 590 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 DHRSXQ8N5I4 330 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 FAM45AQ8TCE6 357 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 USP33Q8TEY7 942 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 MFSD3Q96ES6 412 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 ANKRD36BP1Q96IX9 119 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 CTRCQ99895 268 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 MCMBPQ9BTE3 642 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 KLHL25Q9H0H3 589 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 LRRC40Q9H9A6 602 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 POU2F3Q9UKI9 436 aa18.28■□□□□ 0.52
PTPA-206ENST00000358994 COL2A1P02458 1487 aaPredicted RBP18.28■□□□□ 0.52
PTPA-206ENST00000358994 DHRS12A0PJE2 317 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms