RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CKAP5Q14008 2032 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 ZDBF2Q9HCK1 2354 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 C5orf60A6NFR6 353 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 KPNA3O00505 521 aaPredicted RBP15.73■□□□□ 0.11
TRIM13-201ENST00000356017 CTSLP07711 333 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 SERPINF2P08697 491 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 TDGF1P13385 188 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 SERPINA4P29622 427 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 ACTN2P35609 894 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 PSMD8P48556 350 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 BCL2L1Q07817 233 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 SNX1Q13596 522 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 CYP1B1Q16678 543 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 ITPRIPL1Q6GPH6 555 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 NCEH1Q6PIU2 408 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 TSSK4Q6SA08 328 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 GDPD4Q6W3E5 623 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 USP30Q70CQ3 517 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 KBTBD6Q86V97 674 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 LONP2Q86WA8 852 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 ZNF567Q8N184 647 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 FAM71DQ8N9W8 422 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 KIF18AQ8NI77 898 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 HCAR2Q8TDS4 363 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 ZNF592Q92610 1267 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 AP1M1Q9BXS5 423 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 CEP41Q9BYV8 373 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 SLC25A51Q9H1U9 297 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 PABPC3Q9H361 631 aaKnown RBP15.73■□□□□ 0.11
TRIM13-201ENST00000356017 C10orf88Q9H8K7 445 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 NOD2Q9HC29 1040 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 ITM2CQ9NQX7 267 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 FEZ2Q9UHY8 353 aaPredicted RBP15.73■□□□□ 0.11
TRIM13-201ENST00000356017 SARDHQ9UL12 918 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 NCKAP1Q9Y2A7 1128 aa15.73■□□□□ 0.11
TRIM13-201ENST00000356017 A0A1W2PQ67 120 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 MID1O15344 667 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 OPHN1O60890 802 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 SOCS5O75159 536 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 CA4P22748 312 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 PXNP49023 591 aaPredicted RBP15.72■□□□□ 0.11
TRIM13-201ENST00000356017 TUBB2AQ13885 445 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 USP39Q53GS9 565 aaKnown RBP15.72■□□□□ 0.11
TRIM13-201ENST00000356017 ZNF805Q5CZA5 627 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 ANKRD20A2Q5SQ80 823 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 ANKRD20A1Q5TYW2 823 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 ANKRD20A3Q5VUR7 823 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 C12orf50Q8NA57 414 aaPredicted RBP15.72■□□□□ 0.11
TRIM13-201ENST00000356017 ATL2Q8NHH9 583 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 MAGOHBQ96A72 148 aaKnown RBP15.72■□□□□ 0.11
TRIM13-201ENST00000356017 RTP4Q96DX8 246 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 SPATA13Q96N96 652 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 PPP1R2P1Q96PQ5 205 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 OMDQ99983 421 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 TUBB2BQ9BVA1 445 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 SLC6A17Q9H1V8 727 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 SUV39H2Q9H5I1 410 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 GLOD4Q9HC38 313 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 SMARCAL1Q9NZC9 954 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 GCATO75600 419 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 UGT2B4P06133 528 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 ITGB7P26010 798 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 OXTRP30559 389 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 GKP32189 559 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 DSC2Q02487 901 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 SLC14A2Q15849 920 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 P3H1Q32P28 736 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 CFAP58Q5T655 872 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 BRAT1Q6PJG6 821 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 GSTA5Q7RTV2 222 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 WDR5BQ86VZ2 330 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 CACUL1Q86Y37 369 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 CCDC89Q8N998 374 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 ARRDC2Q8TBH0 407 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 GANCQ8TET4 914 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 NELL1Q92832 810 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 IMP4Q96G21 291 aaKnown RBP15.72■□□□□ 0.11
TRIM13-201ENST00000356017 SPACA7Q96KW9 195 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 TPSD1Q9BZJ3 242 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 FBXL12Q9NXK8 326 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 USP36Q9P275 1121 aaKnown RBP15.72■□□□□ 0.11
TRIM13-201ENST00000356017 DKK3Q9UBP4 350 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 FZD4Q9ULV1 537 aa15.72■□□□□ 0.11
TRIM13-201ENST00000356017 CCDC188H7C350 402 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 PHF2O75151 1096 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 RNASEH2AO75792 299 aaKnown RBP15.71■□□□□ 0.11
TRIM13-201ENST00000356017 URI1O94763 535 aaPredicted RBP15.71■□□□□ 0.11
TRIM13-201ENST00000356017 IGLV3-19P01714 112 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 SP9P0CG40 484 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 CNR2P34972 360 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 FNTAP49354 379 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 TPMTP51580 245 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 POLR2LP62875 67 aaKnown RBP15.71■□□□□ 0.11
TRIM13-201ENST00000356017 ARHGEF18Q6ZSZ5 1173 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 CAMK1DQ8IU85 385 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 HDDC3Q8N4P3 179 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.71■□□□□ 0.11
TRIM13-201ENST00000356017 PAF1Q8N7H5 531 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 KLHL32Q96NJ5 620 aa15.71■□□□□ 0.11
TRIM13-201ENST00000356017 FCRL5Q96RD9 977 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms