RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 DPY19L3Q6ZPD9 716 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 NELFBQ8WX92 580 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 NT5C1BQ96P26 610 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 CMKLR1Q99788 373 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 C1QTNF2Q9BXJ5 285 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 CACNA1DQ01668 2161 aa16.14■□□□□ 0.17
DDX55-202ENST00000354291 M0QYT0 321 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 RNF225M0QZC1 329 aaPredicted RBP16.13■□□□□ 0.17
DDX55-202ENST00000354291 GNA14O95837 355 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 PAEPP09466 180 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 GGCXP38435 758 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 DNA2P51530 1060 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 PPARDQ03181 441 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 UBR7Q8N806 425 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 PCDH19Q8TAB3 1148 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 C2orf49Q9BVC5 232 aaPredicted RBP16.13■□□□□ 0.17
DDX55-202ENST00000354291 TRIM62Q9BVG3 475 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 FAM204AQ9H8W3 233 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 VPS51Q9UID3 782 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 GPR34Q9UPC5 381 aa16.13■□□□□ 0.17
DDX55-202ENST00000354291 CLDN11O75508 207 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 SLC2A3P11169 496 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 CTSEP14091 401 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 BMP6P22004 513 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 L1CAMP32004 1257 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 ELOCQ15369 112 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 STILQ15468 1287 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 PHF19Q5T6S3 580 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 TMEM164Q5U3C3 297 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 BEND5Q7L4P6 421 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 VPS36Q86VN1 386 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 CCNJLQ8IV13 435 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 PPM1KQ8N3J5 372 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 TMEM159Q96B96 161 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 TBATAQ96M53 351 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 PSMB7Q99436 277 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 POPDC2Q9HBU9 364 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 TUBD1Q9UJT1 453 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 WASF2Q9Y6W5 498 aa16.12■□□□□ 0.17
DDX55-202ENST00000354291 BIN1O00499 593 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 AP1G1O43747 822 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 GADD45BO75293 160 aaPredicted RBP16.11■□□□□ 0.17
DDX55-202ENST00000354291 FGFR1OPO95684 399 aaKnown RBP16.11■□□□□ 0.17
DDX55-202ENST00000354291 IGLV3-25P01717 112 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 RHOCP08134 193 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 ITGB7P26010 798 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 CD82P27701 267 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 CCR1P32246 355 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 EIF4A3P38919 411 aaKnown RBP16.11■□□□□ 0.17
DDX55-202ENST00000354291 YWHAZP63104 245 aaKnown RBP16.11■□□□□ 0.17
DDX55-202ENST00000354291 ZFP36L1Q07352 338 aaKnown RBP16.11■□□□□ 0.17
DDX55-202ENST00000354291 PAK1Q13153 545 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 C22orf39Q6P5X5 142 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 RD3Q7Z3Z2 195 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 ATCAYQ86WG3 371 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 HID1Q8IV36 788 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 FSTL5Q8N475 847 aaPredicted RBP16.11■□□□□ 0.17
DDX55-202ENST00000354291 IL22RA1Q8N6P7 574 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 C9orf43Q8TAL5 461 aaPredicted RBP16.11■□□□□ 0.17
DDX55-202ENST00000354291 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 SIK2Q9H0K1 926 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 DDIT4Q9NX09 232 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 SRPK3Q9UPE1 567 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 CTNND2Q9UQB3 1225 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 TBC1D30Q9Y2I9 924 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 RNF215Q9Y6U7 377 aa16.11■□□□□ 0.17
DDX55-202ENST00000354291 STMND1H3BQB6 276 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 MTSS1O43312 755 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 TSPAN6O43657 245 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 CNTN5O94779 1100 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 ALPIP09923 528 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 ACADSBP45954 432 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 ATP1A2P50993 1020 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 CLCN6P51797 869 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 CDH4P55283 916 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 MARSP56192 900 aaKnown RBP16.1■□□□□ 0.17
DDX55-202ENST00000354291 CDK17Q00537 523 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 GCNT1Q02742 428 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 TAF5Q15542 800 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 LVRNQ6Q4G3 990 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 PARS2Q7L3T8 475 aaKnown RBP16.1■□□□□ 0.17
DDX55-202ENST00000354291 TRIM59Q8IWR1 403 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 EHBP1Q8NDI1 1231 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 DENND6BQ8NEG7 585 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 OR6C4Q8NGE1 309 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 TSACCQ96A04 125 aaPredicted RBP16.1■□□□□ 0.17
DDX55-202ENST00000354291 CENPTQ96BT3 561 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 HEPHQ9BQS7 1158 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 GGT7Q9UJ14 662 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 ITM2BQ9Y287 266 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.1■□□□□ 0.17
DDX55-202ENST00000354291 HS3ST4Q9Y661 456 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 DOPEY1Q5JWR5 2465 aa16.1■□□□□ 0.17
DDX55-202ENST00000354291 A0A0D9SEW6 157 aa16.09■□□□□ 0.17
DDX55-202ENST00000354291 ADCY5O95622 1261 aa16.09■□□□□ 0.17
DDX55-202ENST00000354291 CCL4P13236 92 aa16.09■□□□□ 0.17
DDX55-202ENST00000354291 GPD2P43304 727 aa16.09■□□□□ 0.17
DDX55-202ENST00000354291 BLKP51451 505 aa16.09■□□□□ 0.17
DDX55-202ENST00000354291 STX17P56962 302 aa16.09■□□□□ 0.17
DDX55-202ENST00000354291 YPEL5P62699 121 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms