RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 LCA5Q86VQ0 697 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 TMC8Q8IU68 726 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 DENND1CQ8IV53 801 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 CFAP52Q8N1V2 620 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 GBP7Q8N8V2 638 aaPredicted RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 CCDC63Q8NA47 563 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 C2CD4AQ8NCU7 369 aaPredicted RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 ARMC2Q8NEN0 867 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 OR7D4Q8NG98 312 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 AUTS2Q8WXX7 1259 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 PEX13Q92968 403 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 CLP1Q92989 425 aaKnown RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 PABPC5Q96DU9 382 aaKnown RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 VPS39Q96JC1 886 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 PSKH2Q96QS6 385 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 TRIB3Q96RU7 358 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 YME1L1Q96TA2 773 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 DDX50Q9BQ39 737 aaKnown RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 TSSK1BQ9BXA7 367 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 FSD1LQ9BXM9 530 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 SLC13A1Q9BZW2 595 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 NACA2Q9H009 215 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 IQCGQ9H095 443 aaKnown RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 ALG13Q9NP73 1137 aaKnown RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 IARS2Q9NSE4 1012 aaKnown RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 TXNDC16Q9P2K2 825 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 SLC2A6Q9UGQ3 507 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 RIMKLBQ9ULI2 386 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 MTO1Q9Y2Z2 717 aaKnown RBP7□□□□□ -1.29
TRIM55-203ENST00000350034 HCN4Q9Y3Q4 1203 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 USH1CQ9Y6N9 552 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 CHD8Q9HCK8 2581 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 NUP205Q92621 2012 aa7□□□□□ -1.29
TRIM55-203ENST00000350034 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 PRRG1O14668 218 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 SLC7A4O43246 635 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ZMPSTE24O75844 475 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 UBOX5O94941 541 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 VAPBO95292 243 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 CD160O95971 181 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 TOP3BO95985 862 aaKnown RBP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 AHSGP02765 367 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 FGF1P05230 155 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 C2P06681 752 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 RHOCP08134 193 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 CNPP09543 421 aaKnown RBP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 DLDP09622 509 aaKnown RBP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 TROVE2P10155 538 aaKnown RBP eCLIP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 FGF3P11487 239 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 PFKLP17858 780 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 PAMP19021 973 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 HLA-DPA1P20036 260 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 TYK2P29597 1187 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ALDH3A1P30838 453 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ETFBP38117 255 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 LIG3P49916 1009 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 OXCT1P55809 520 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 SLC7A9P82251 487 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ZXDBP98169 803 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 BST1Q10588 318 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 SF3A3Q12874 501 aaKnown RBP eCLIP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ZNF177Q13360 481 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 PPIGQ13427 754 aaKnown RBP eCLIP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 GRM3Q14832 879 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 PCLAFQ15004 111 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 CYTH1Q15438 398 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 CNGA3Q16281 694 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 UGP2Q16851 508 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 PPM1JQ5JR12 505 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 SIRPB2Q5JXA9 342 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ATG16L1Q676U5 607 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 MBLAC2Q68D91 279 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 C16orf46Q6P387 395 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 GAREM2Q75VX8 874 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 NLRP9Q7RTR0 991 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 CMC1Q7Z7K0 106 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 NUDCD3Q8IVD9 361 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 HERC6Q8IVU3 1022 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 MFSD6LQ8IWD5 586 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 FIBCD1Q8N539 461 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 FITM2Q8N6M3 262 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ACVR1CQ8NER5 493 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 OR13J1Q8NGT2 312 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ATP2A3Q93084 1043 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 E2F7Q96AV8 911 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ALG14Q96F25 216 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 NSMCE3Q96MG7 304 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 SLC22A12Q96S37 553 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 SEMA3CQ99985 751 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 FAM167BQ9BTA0 163 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 MECRQ9BV79 373 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 C1QTNF1Q9BXJ1 281 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 TRIM55Q9BYV6 548 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 POLR1EQ9GZS1 481 aaKnown RBP6.99□□□□□ -1.29
TRIM55-203ENST00000350034 ATXN3LQ9H3M9 355 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 KCNK13Q9HB14 408 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 TMEM216Q9P0N5 145 aa6.99□□□□□ -1.29
TRIM55-203ENST00000350034 DNMT3BQ9UBC3 853 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms