RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 TRIM8Q9BZR9 551 aa14.41□□□□□ -0.1
RLIM-202ENST00000349225 MORF4L1Q9UBU8 362 aa14.41□□□□□ -0.1
RLIM-202ENST00000349225 TLL2Q9Y6L7 1015 aa14.41□□□□□ -0.1
RLIM-202ENST00000349225 TARM1B6A8C7 271 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 CLDN25C9JDP6 229 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 PIGRP01833 764 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 MZF1P28698 734 aaPredicted RBP14.4□□□□□ -0.1
RLIM-202ENST00000349225 SPRED1Q7Z699 444 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 ANKRD13BQ86YJ7 626 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 CLIP4Q8N3C7 705 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 ZC3H15Q8WU90 426 aaKnown RBP14.4□□□□□ -0.1
RLIM-202ENST00000349225 CLSTN3Q9BQT9 956 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 OSBPL2Q9H1P3 480 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 EGFL7Q9UHF1 273 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 RAD54BQ9Y620 910 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 RASAL1O95294 804 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 C1QTNF8P60827 252 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 RPS27LQ71UM5 84 aaKnown RBP14.4□□□□□ -0.1
RLIM-202ENST00000349225 KRT27Q7Z3Y8 459 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 SPATA6LQ8N4H0 392 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.4□□□□□ -0.1
RLIM-202ENST00000349225 SHCBP1Q8NEM2 672 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 MFSD3Q96ES6 412 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 RNF103-CHMP3A0A140T963 221 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 DLX3O60479 287 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 XYLBO75191 536 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 BCAS1O75363 584 aaPredicted RBP14.4□□□□□ -0.1
RLIM-202ENST00000349225 MTERF2Q49AM1 385 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 AGKQ53H12 422 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 PYCR3Q53H96 274 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 CNSTQ6PJW8 725 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 ZBTB33Q86T24 672 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 RETREG3Q86VR2 466 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 BRSK2Q8IWQ3 736 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 COLGALT2Q8IYK4 626 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 SPPL2BQ8TCT7 592 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 QKIQ96PU8 341 aaKnown RBP eCLIP14.4□□□□□ -0.1
RLIM-202ENST00000349225 FTHL17Q9BXU8 183 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 ALOXE3Q9BYJ1 711 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 CEP44Q9C0F1 390 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 ELOVL4Q9GZR5 314 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 NGRNQ9NPE2 291 aaKnown RBP14.4□□□□□ -0.1
RLIM-202ENST00000349225 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.4□□□□□ -0.1
RLIM-202ENST00000349225 DTLQ9NZJ0 730 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 TXNDC16Q9P2K2 825 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 IFT52Q9Y366 437 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 FIS1Q9Y3D6 152 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 PCDHA10Q9Y5I2 948 aa14.4□□□□□ -0.1
RLIM-202ENST00000349225 LRRIQ4A6NIV6 560 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 NME4O00746 187 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 PHGDHO43175 533 aaKnown RBP14.39□□□□□ -0.11
RLIM-202ENST00000349225 UGT2B4P06133 528 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 MLNP12872 115 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 SHMT2P34897 504 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 NEK2P51955 445 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 HNRNPFP52597 415 aaKnown RBP14.39□□□□□ -0.11
RLIM-202ENST00000349225 ZNF699Q32M78 642 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 CDKL3Q8IVW4 592 aaPredicted RBP14.39□□□□□ -0.11
RLIM-202ENST00000349225 COLGALT1Q8NBJ5 622 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 OMDQ99983 421 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 RAD21L1Q9H4I0 556 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 TASP1Q9H6P5 420 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 UBR3Q6ZT12 1888 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 ZCWPW2A0A1B0GU75 182 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 K7ERI5 159 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 USP12O75317 370 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 GUCY1B2O75343 617 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 BBOX1O75936 387 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 HTR1AP08908 422 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 JUNBP17275 347 aaPredicted RBP14.39□□□□□ -0.11
RLIM-202ENST00000349225 SFNP31947 248 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 CD68P34810 354 aaPredicted RBP14.39□□□□□ -0.11
RLIM-202ENST00000349225 CAPGP40121 348 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 PRKCEQ02156 737 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 PPIL2Q13356 520 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 NAB1Q13506 487 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 IRAK1BP1Q5VVH5 260 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 ZNF773Q6PK81 442 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 WDR49Q8IV35 697 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 MFSD4AQ8N468 514 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 MCPH1Q8NEM0 835 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 EFHD1Q9BUP0 239 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 HOXD1Q9GZZ0 328 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 TDRD3Q9H7E2 651 aaKnown RBP14.39□□□□□ -0.11
RLIM-202ENST00000349225 LTB4R2Q9NPC1 389 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 TMA7Q9Y2S6 64 aaKnown RBP14.39□□□□□ -0.11
RLIM-202ENST00000349225 PCDHGA3Q9Y5H0 932 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 SCN9AQ15858 1988 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 PRKAA2P54646 552 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 KRT76Q01546 638 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 PIGFQ07326 219 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 ZNF460Q14592 562 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 FAM35AQ86V20 835 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 KHSRPQ92945 711 aaKnown RBP eCLIP14.39□□□□□ -0.115e-6■■■□□ 19
RLIM-202ENST00000349225 ARPC5LQ9BPX5 153 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 VTI1BQ9UEU0 232 aa14.39□□□□□ -0.11
RLIM-202ENST00000349225 M0QYV0 167 aa14.38□□□□□ -0.11
RLIM-202ENST00000349225 AURKAO14965 403 aa14.38□□□□□ -0.11
RLIM-202ENST00000349225 H2AFYO75367 372 aaKnown RBP14.38□□□□□ -0.11
RLIM-202ENST00000349225 HNRNPLP14866 589 aaKnown RBP eCLIP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms