RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 METTL25Q8N6Q8 603 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 SH3RF2Q8TEC5 729 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 BRI3BPQ8WY22 251 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 ATP6V1E2Q96A05 226 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 MS4A4AQ96JQ5 239 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 SLC39A8Q9C0K1 460 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 EFCAB1Q9HAE3 211 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 GMPR2Q9P2T1 348 aaKnown RBP18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 ANKRD6Q9Y2G4 727 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 CCL15-CCL14A0A0B4J2E2 113 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 TTC24A2A3L6 582 aaPredicted RBP18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 RTN3O95197 1032 aaPredicted RBP18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 APOA4P06727 396 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 CALRP27797 417 aaKnown RBP18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 CCL15Q16663 113 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 ZNF467Q7Z7K2 595 aaPredicted RBP18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 LDB1Q86U70 411 aaPredicted RBP18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 DQX1Q8TE96 717 aaKnown RBP18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 NCSTNQ92542 709 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 PHF21BQ96EK2 531 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 PGAP3Q96FM1 320 aaPredicted RBP18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 DNAI2Q9GZS0 605 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 DMAP1Q9NPF5 467 aaPredicted RBP18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 NEU3Q9UQ49 428 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 CSPG5O95196 566 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 C1QTNF8P60827 252 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 CDC42EP1Q00587 391 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 MYBPC1Q00872 1141 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 RALGDSQ12967 914 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 GRB14Q14449 540 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 LDLRAD1Q5T700 205 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 IL23RQ5VWK5 629 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 LAYNQ6UX15 382 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 ARHGAP18Q8N392 663 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 PIP4K2CQ8TBX8 421 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 RDH11Q8TC12 318 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 VAT1Q99536 393 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 RTP3Q9BQQ7 232 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 FLRT1Q9NZU1 646 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 MPP6Q9NZW5 540 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 RAD54BQ9Y620 910 aa18.29■□□□□ 0.52
PTP4A3-202ENST00000349124 E7ENX8 843 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 MAFKO60675 156 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 PSEN2P49810 448 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 AIF1P55008 147 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 NRF1Q16656 503 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 TIGD5Q53EQ6 642 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 INTS6LQ5JSJ4 861 aaKnown RBP18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 TLK2Q86UE8 772 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 MARVELD2Q8N4S9 558 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 MYLPFQ96A32 169 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 OLFM1Q99784 485 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 GLOD4Q9HC38 313 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 TSC2P49815 1807 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 DENRO43583 198 aaKnown RBP18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 NELFEP18615 380 aaKnown RBP18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 EPHX2P34913 555 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 SLC5A9Q2M3M2 681 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 DCLRE1AQ6PJP8 1040 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 TICAM1Q8IUC6 712 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 PDCD6IPQ8WUM4 868 aaKnown RBP18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 BRD8Q9H0E9 1235 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 SPON1Q9HCB6 807 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 RBM22Q9NW64 420 aaKnown RBP eCLIP18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 CCDC167Q9P0B6 97 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 MID2Q9UJV3 735 aa18.28■□□□□ 0.52
PTP4A3-202ENST00000349124 ATP6AP2A0A1C7CYW4 349 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 ATP6AP2O75787 350 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 BCAS2O75934 225 aaPredicted RBP18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 F9P00740 461 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 HLA-DQB2P05538 268 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 SCNN1GP51170 649 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 SULT2A1Q06520 285 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 RARS2Q5T160 578 aaKnown RBP18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 RBM44Q6ZP01 1051 aaKnown RBP18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 ATPAF2Q8N5M1 289 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 DNAJC1Q96KC8 554 aaKnown RBP18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 PRPF18Q99633 342 aaKnown RBP18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 GRIP2Q9C0E4 1043 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 MRPL46Q9H2W6 279 aaKnown RBP18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 TRPC7Q9HCX4 862 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 VTI1BQ9UEU0 232 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 FBXO5Q9UKT4 447 aa18.27■□□□□ 0.52
PTP4A3-202ENST00000349124 CACNG3O60359 315 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 TRPA1O75762 1119 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 MOCS2O96007 188 aaPredicted RBP18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 FGFR3P22607 806 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 BRCC3P46736 316 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 KCNC1P48547 511 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 CRYBB1P53674 252 aaPredicted RBP18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 LSAMPQ13449 338 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 PTK2BQ14289 1009 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 LINC00523Q86TU6 105 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 LRRTM3Q86VH5 581 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 OR9I1Q8NGQ6 314 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 SPPL2BQ8TCT7 592 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 HAPLN3Q96S86 360 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 CCDC28BQ9BUN5 200 aa18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 UBE2OQ9C0C9 1292 aaKnown RBP18.27■□□□□ 0.51
PTP4A3-202ENST00000349124 IGSF5Q9NSI5 407 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms