RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 SERPINB11Q96P15 392 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 ALG9Q9H6U8 611 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 GNEQ9Y223 722 aaKnown RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 CRTAMO95727 393 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 SERPINB1P30740 379 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 DCLRE1AQ6PJP8 1040 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 LENG8Q96PV6 779 aaPredicted RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 TMEM216Q9P0N5 145 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 STX7O15400 261 aaKnown RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 ARF4P18085 180 aaPredicted RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 CLK1P49759 484 aaKnown RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 LIMK2P53671 638 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 ATP1A4Q13733 1029 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 CERCAMQ5T4B2 595 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 SATL1Q86VE3 508 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 PGAM4Q8N0Y7 254 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 DACT3Q96B18 629 aaPredicted RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 TSC22D4Q9Y3Q8 395 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 TEX264Q9Y6I9 313 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 MYO5AQ9Y4I1 1855 aaKnown RBP14.89□□□□□ -0.03
NUP50-201ENST00000347635 STRCQ7RTU9 1775 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 XYLBO75191 536 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 YWHAQP27348 245 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 PPM1AP35813 382 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 PTPN9P43378 593 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 TWF1Q12792 350 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 CD99L2Q8TCZ2 262 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 RNF145Q96MT1 663 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 PANX3Q96QZ0 392 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 SPATA16Q9BXB7 569 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 RHOJQ9H4E5 214 aa14.89□□□□□ -0.03
NUP50-201ENST00000347635 HIST1H2AGP0C0S8 130 aaPredicted RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 HNRNPLP14866 589 aaKnown RBP eCLIP14.88□□□□□ -0.03
NUP50-201ENST00000347635 HIST1H2ADP20671 130 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 TTKP33981 857 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 PSEN1P49768 467 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 C6orf52Q5T4I8 152 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 AMIGO2Q86SJ2 522 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 ZNF557Q8N988 423 aaPredicted RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 HASPINQ8TF76 798 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 MAGED4Q96JG8 741 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 HIST1H2AHQ96KK5 128 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 TUBGCP5Q96RT8 1024 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 HIST1H2AJQ99878 128 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 H2AFJQ9BTM1 129 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 HES2Q9Y543 173 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 CKMP06732 381 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 PABPC1LQ4VXU2 614 aaKnown RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 AARS2Q5JTZ9 985 aaKnown RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 GJC2Q5T442 439 aaPredicted RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 ILDR2Q71H61 639 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 ZDHHC14Q8IZN3 488 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 UBR7Q8N806 425 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 TRPC4APQ8TEL6 797 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 GLMNQ92990 594 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 CLK4Q9HAZ1 481 aaKnown RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 PNPLA8Q9NP80 782 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 SERPINH1P50454 418 aaKnown RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 SCNN1GP51170 649 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 CLCN5P51795 746 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 SMARCB1Q12824 385 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 CTBP1Q13363 440 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 ZYG11AQ6WRX3 759 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 LRRC8DQ7L1W4 858 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 CCDC185Q8N715 623 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 ACTRT2Q8TDY3 377 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 ZNF483Q8TF39 744 aaPredicted RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 FAXDC2Q96IV6 333 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 TCF12Q99081 682 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 STRA6Q9BX79 667 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 WWOXQ9NZC7 414 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 POLG2Q9UHN1 485 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 ZNF536O15090 1300 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 SLC12A8A0AV02 714 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 DLDP09622 509 aaKnown RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 GK5Q6ZS86 529 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 ANKS3Q6ZW76 656 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 NECAB2Q7Z6G3 386 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 TOP6BLQ8N6T0 577 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 OR9Q1Q8NGQ5 310 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 DENND1AQ8TEH3 1009 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 OXCT2Q9BYC2 517 aaPredicted RBP14.88□□□□□ -0.03
NUP50-201ENST00000347635 C1orf21Q9H246 121 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 ANAPC2Q9UJX6 822 aa14.88□□□□□ -0.03
NUP50-201ENST00000347635 ADAMTS7Q9UKP4 1686 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 COL18A1P39060 1754 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 EVPLLA8MZ36 301 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 SELPP16109 830 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 CYP2C18P33260 490 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 AIF1P55008 147 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 CDK18Q07002 472 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 TRAF2Q12933 501 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 ARHGEF7Q14155 803 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 CA9Q16790 459 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 CCDC149Q6ZUS6 474 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 MPP5Q8N3R9 675 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 GPR63Q9BZJ6 419 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 FAM105AQ9NUU6 356 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 PPM1HQ9ULR3 514 aa14.87□□□□□ -0.03
NUP50-201ENST00000347635 DDX60Q8IY21 1712 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms