RNA–Protein interactions for RNA: ENST00000346330.6

UBE2A-201, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2A, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-201ENST00000346330 TMEM248Q9NWD8 314 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 CHMP5Q9NZZ3 219 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 HS3ST3A1Q9Y663 406 aa11.12□□□□□ -0.63
UBE2A-201ENST00000346330 TCRBV5S1A1TA0A578 114 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 MMP20O60882 483 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 USP12O75317 370 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 TMCC1O94876 653 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 JUNDP17535 347 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 SDC4P31431 198 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 SOX5P35711 763 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 PTPN9P43378 593 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 HNRNPKP61978 463 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBE2A-201ENST00000346330 GABREP78334 506 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 E2F1Q01094 437 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 NRG1Q02297 640 aaPredicted RBP11.11□□□□□ -0.63
UBE2A-201ENST00000346330 SLC20A2Q08357 652 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 MYLK3Q32MK0 819 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 ZNF805Q5CZA5 627 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 VPS36Q86VN1 386 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 FAM181AQ8N9Y4 354 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 OR2AP1Q8NGE2 309 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 LMX1AQ8TE12 382 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 ISG20Q96AZ6 181 aaKnown RBP11.11□□□□□ -0.63
UBE2A-201ENST00000346330 HMCESQ96FZ2 354 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 EXOC2Q96KP1 924 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 LENG8Q96PV6 779 aaPredicted RBP11.11□□□□□ -0.63
UBE2A-201ENST00000346330 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBE2A-201ENST00000346330 CLPBQ9H078 707 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 ASCL3Q9NQ33 180 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 FANCLQ9NW38 375 aa11.11□□□□□ -0.63
UBE2A-201ENST00000346330 CPED1A4D0V7 1026 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 CYSRT1A8MQ03 144 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 RRP8O43159 456 aaKnown RBP11.1□□□□□ -0.63
UBE2A-201ENST00000346330 CCP110O43303 1012 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 AQP9O43315 295 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 KDELR3O43731 214 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 RAMP2O60895 175 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 GSRP00390 522 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 PRKCGP05129 697 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 TIMP2P16035 220 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 EEF1GP26641 437 aaKnown RBP11.1□□□□□ -0.63
UBE2A-201ENST00000346330 RABIFP47224 123 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 MAPKAPK2P49137 400 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 PDX1P52945 283 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 RPL7AP62424 266 aaKnown RBP11.1□□□□□ -0.63
UBE2A-201ENST00000346330 OGDHQ02218 1023 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 CCDC15Q0P6D6 951 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 POLD3Q15054 466 aaPredicted RBP11.1□□□□□ -0.63
UBE2A-201ENST00000346330 ACBD5Q5T8D3 534 aaPredicted RBP11.1□□□□□ -0.63
UBE2A-201ENST00000346330 WDR59Q6PJI9 974 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 LRRC69Q6ZNQ3 347 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 MON1BQ7L1V2 547 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 STRADAQ7RTN6 431 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 EFL1Q7Z2Z2 1120 aaKnown RBP11.1□□□□□ -0.63
UBE2A-201ENST00000346330 ZSWIM9Q86XI8 627 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 DNAAF5Q86Y56 855 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 PLPP6Q8IY26 295 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 SLC35F3Q8IY50 421 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 ENOX1Q8TC92 643 aaKnown RBP11.1□□□□□ -0.63
UBE2A-201ENST00000346330 MAPK15Q8TD08 544 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 TBC1D31Q96DN5 1066 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 IFT43Q96FT9 208 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 ATXN7L3BQ96GX2 97 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 UBL7Q96S82 380 aaPredicted RBP11.1□□□□□ -0.63
UBE2A-201ENST00000346330 WRAP53Q9BUR4 548 aaKnown RBP11.1□□□□□ -0.63
UBE2A-201ENST00000346330 LRRC61Q9BV99 259 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 MAGEH1Q9H213 219 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 CPNE5Q9HCH3 593 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 LMBRD1Q9NUN5 540 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 GPATCH2LQ9NWQ4 482 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 LHX3Q9UBR4 397 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 COQ6Q9Y2Z9 468 aa11.1□□□□□ -0.63
UBE2A-201ENST00000346330 NEMP1O14524 444 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 FPGTO14772 594 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 MUSKO15146 869 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 ATXN7O15265 892 aaPredicted RBP11.09□□□□□ -0.63
UBE2A-201ENST00000346330 TSPAN6O43657 245 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 BUB1O43683 1085 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 PIGNO95427 931 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 POP4O95707 220 aaKnown RBP11.09□□□□□ -0.63
UBE2A-201ENST00000346330 GP1BAP07359 652 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 ALPPL2P10696 532 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 KRT3P12035 628 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 EPHB2P29323 1055 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 ACTN2P35609 894 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 RGRP47804 291 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 CXADRP78310 365 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 SGCGQ13326 291 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 SYCP1Q15431 976 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 CYTH1Q15438 398 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 CLEC16AQ2KHT3 1053 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 ISXQ2M1V0 245 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 KLHL40Q2TBA0 621 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 PRRT3Q5FWE3 981 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 C3orf38Q5JPI3 329 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 ZCCHC8Q6NZY4 707 aaKnown RBP11.09□□□□□ -0.63
UBE2A-201ENST00000346330 GDPD4Q6W3E5 623 aa11.09□□□□□ -0.63
UBE2A-201ENST00000346330 APTXQ7Z2E3 356 aaKnown RBP11.09□□□□□ -0.63
UBE2A-201ENST00000346330 TTC7BQ86TV6 843 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms