RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 PRKCIP41743 596 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 DUSP3P51452 185 aaPredicted RBP18.04■□□□□ 0.48
CKLF-202ENST00000345436 DAB2P98082 770 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 PTK2BQ14289 1009 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 ACAP1Q15027 740 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 FIGNQ5HY92 759 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 LEKR1Q6ZMV7 388 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 DNAAF5Q86Y56 855 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 OR13H1Q8NG92 308 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 OR6K2Q8NGY2 324 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 CXorf40AQ8TE69 158 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 C1QTNF2Q9BXJ5 285 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 MAGEB5Q9BZ81 275 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 CPEB1Q9BZB8 566 aaKnown RBP18.04■□□□□ 0.48
CKLF-202ENST00000345436 DHX35Q9H5Z1 703 aaKnown RBP18.04■□□□□ 0.48
CKLF-202ENST00000345436 FZD3Q9NPG1 666 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 NCKIPSDQ9NZQ3 722 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 DKK3Q9UBP4 350 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 DKK4Q9UBT3 224 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 NEU3Q9UQ49 428 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 CA5BQ9Y2D0 317 aa18.04■□□□□ 0.48
CKLF-202ENST00000345436 PLXNA2O75051 1894 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 DOCK4Q8N1I0 1966 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 TRABD2BA6NFA1 517 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 TMEM191CA6NGB0 347 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 IGLON5A6NGN9 336 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 CLDN2P57739 230 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 ELP6Q0PNE2 266 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 GCNT7Q6ZNI0 430 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 BTN2A2Q8WVV5 523 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 TSC1Q92574 1164 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 HMCESQ96FZ2 354 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 SYT11Q9BT88 431 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 USP29Q9HBJ7 922 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 DNAJC28Q9NX36 388 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 TAS2R14Q9NYV8 317 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 CNOT8Q9UFF9 292 aaKnown RBP18.03■□□□□ 0.48
CKLF-202ENST00000345436 ACTL7AQ9Y615 435 aa18.03■□□□□ 0.48
CKLF-202ENST00000345436 SDC3O75056 442 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 TM7SF2O76062 418 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 ACP1P24666 158 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 ACADVLP49748 655 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 THOP1P52888 689 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 DNAJC3Q13217 504 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 NR1I3Q14994 352 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 ATXN7L2Q5T6C5 722 aaPredicted RBP18.02■□□□□ 0.48
CKLF-202ENST00000345436 ERAP2Q6P179 960 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 ZNF571Q7Z3V5 609 aaPredicted RBP18.02■□□□□ 0.48
CKLF-202ENST00000345436 LZTR1Q8N653 840 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 PAF1Q8N7H5 531 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 OR4C6Q8NH72 309 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 ZNF653Q96CK0 615 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 ZNF641Q96N77 438 aaPredicted RBP18.02■□□□□ 0.48
CKLF-202ENST00000345436 ZWILCHQ9H900 591 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 PCSK1NQ9UHG2 260 aa18.02■□□□□ 0.48
CKLF-202ENST00000345436 NYNRINQ9P2P1 1898 aaKnown RBP18.01■□□□□ 0.47
CKLF-202ENST00000345436 SPTY2D1-AS1A0A0U1RR47 76 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 SIGLEC6O43699 453 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 PIAS2O75928 621 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 TPM3P06753 285 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 GKP32189 559 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 HCAR3P49019 387 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 YPEL5P62699 121 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 RFTN1Q14699 578 aaPredicted RBP18.01■□□□□ 0.47
CKLF-202ENST00000345436 BOLA3Q53S33 107 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 TMCO4Q5TGY1 634 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 KANSL1Q7Z3B3 1105 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 PARGQ86W56 976 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 CACTIN-AS1Q8N1I8 211 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 SLC25A45Q8N413 288 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 SYN2Q92777 582 aaPredicted RBP18.01■□□□□ 0.47
CKLF-202ENST00000345436 NXPE2Q96DL1 559 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 BMFQ96LC9 184 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 NAP1L5Q96NT1 182 aaPredicted RBP18.01■□□□□ 0.47
CKLF-202ENST00000345436 TUBGCP5Q96RT8 1024 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.01■□□□□ 0.47
CKLF-202ENST00000345436 NOL6Q9H6R4 1146 aaKnown RBP18.01■□□□□ 0.47
CKLF-202ENST00000345436 NLGN3Q9NZ94 848 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 CSNK1G3Q9Y6M4 447 aa18.01■□□□□ 0.47
CKLF-202ENST00000345436 A0A1W2PQJ5 194 aa18■□□□□ 0.47
CKLF-202ENST00000345436 TMEM110-MUSTN1A8MSY1 372 aa18■□□□□ 0.47
CKLF-202ENST00000345436 RNF103O00237 685 aa18■□□□□ 0.47
CKLF-202ENST00000345436 AREL1O15033 823 aa18■□□□□ 0.47
CKLF-202ENST00000345436 SCAMP1O15126 338 aa18■□□□□ 0.47
CKLF-202ENST00000345436 PRAMEF11O60813 436 aa18■□□□□ 0.47
CKLF-202ENST00000345436 PALMO75781 387 aa18■□□□□ 0.47
CKLF-202ENST00000345436 CSF2P04141 144 aa18■□□□□ 0.47
CKLF-202ENST00000345436 PCK1P35558 622 aa18■□□□□ 0.47
CKLF-202ENST00000345436 ARL4AP40617 200 aa18■□□□□ 0.47
CKLF-202ENST00000345436 RENBPP51606 427 aa18■□□□□ 0.47
CKLF-202ENST00000345436 UBASH3AP57075 661 aa18■□□□□ 0.47
CKLF-202ENST00000345436 POLR2LP62875 67 aaKnown RBP18■□□□□ 0.47
CKLF-202ENST00000345436 OGDHQ02218 1023 aa18■□□□□ 0.47
CKLF-202ENST00000345436 IQCB1Q15051 598 aa18■□□□□ 0.47
CKLF-202ENST00000345436 KLHL40Q2TBA0 621 aa18■□□□□ 0.47
CKLF-202ENST00000345436 PROX2Q3B8N5 592 aa18■□□□□ 0.47
CKLF-202ENST00000345436 TDRD12Q587J7 1177 aaKnown RBP18■□□□□ 0.47
CKLF-202ENST00000345436 PPP6R3Q5H9R7 873 aaPredicted RBP18■□□□□ 0.47
CKLF-202ENST00000345436 BRAT1Q6PJG6 821 aa18■□□□□ 0.47
CKLF-202ENST00000345436 RFX8Q6ZV50 586 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms