RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SNX9Q9Y5X1 595 aa9.78□□□□□ -0.84
HOXA1-201ENST00000343060 IGKV6-21A0A0C4DH24 114 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 TMEM233B4DJY2 109 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 MRASO14807 208 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 RASAL1O95294 804 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 STAMBPO95630 424 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 SNRPB2P08579 225 aaKnown RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 HSPA8P11142 646 aaKnown RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 GNL1P36915 607 aaPredicted RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ABCG1P45844 678 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 GJA8P48165 433 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 HLCSP50747 726 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ATXN1P54253 815 aaKnown RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 TNK2Q07912 1038 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 SLC12A1Q13621 1099 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 FASTKQ14296 549 aaKnown RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 JADE1Q6IE81 842 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ABRAXAS1Q6UWZ7 409 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 CYP2R1Q6VVX0 501 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 FSTL5Q8N475 847 aaPredicted RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 MTMR14Q8NCE2 650 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 KCTD4Q8WVF5 259 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 TSNARE1Q96NA8 513 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 PGLYRP2Q96PD5 576 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 NAA50Q9GZZ1 169 aaKnown RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 TRPC7Q9HCX4 862 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 BFARQ9NZS9 450 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ABCD2Q9UBJ2 740 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 TLK1Q9UKI8 766 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 TNFSF13BQ9Y275 285 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 CORINQ9Y5Q5 1042 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 SAC3D1A6NKF1 404 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 LACTBL1A8MY62 500 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ACOX3O15254 700 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 F7P08709 466 aaPredicted RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 CYP2C9P11712 490 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ARL4AP40617 200 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 POLD2P49005 469 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 CCT8P50990 548 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 GTF2A2P52657 109 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 SNX16P57768 344 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 IFRD2Q12894 506 aaPredicted RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 NR1D2Q14995 579 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 PAFAH1B3Q15102 231 aaKnown RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 LCN8Q6JVE9 175 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 STRADAQ7RTN6 431 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ERO1BQ86YB8 467 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ANKRD13AQ8IZ07 590 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 SIX6OS1Q8N1H7 587 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 NLGN1Q8N2Q7 840 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 SLC15A4Q8N697 577 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 PCYOX1LQ8NBM8 494 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 RNF149Q8NC42 400 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 FAM110BQ8TC76 370 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 PPWD1Q96BP3 646 aaKnown RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ROPN1LQ96C74 230 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ZNF641Q96N77 438 aaPredicted RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 PSD2Q9BQI7 771 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 C1orf50Q9BV19 199 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 RHOBTB2Q9BYZ6 727 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 TRIM15Q9C019 465 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ARMC7Q9H6L4 198 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 GPN2Q9H9Y4 310 aaPredicted RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 XPR1Q9UBH6 696 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 ZNF214Q9UL59 606 aaPredicted RBP9.77□□□□□ -0.85
HOXA1-201ENST00000343060 SLC39A10Q9ULF5 831 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 FZD10Q9ULW2 581 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 TRIM17Q9Y577 477 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 RAD54BQ9Y620 910 aa9.77□□□□□ -0.85
HOXA1-201ENST00000343060 RBM47A0AV96 593 aaKnown RBP9.76□□□□□ -0.85
HOXA1-201ENST00000343060 MAGEB16A2A368 324 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 ERI2A8K979 691 aaKnown RBP9.76□□□□□ -0.85
HOXA1-201ENST00000343060 CFAP99D6REC4 459 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 CCNA2P20248 432 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 CAPGP40121 348 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 RPL34P49207 117 aaKnown RBP9.76□□□□□ -0.85
HOXA1-201ENST00000343060 OSTNP61366 133 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 ATP6V0D1P61421 351 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 OLIG2Q13516 323 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 ATP1A4Q13733 1029 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 OXA1LQ15070 435 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 AGKQ53H12 422 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 PPP1R26Q5T8A7 1209 aaPredicted RBP9.76□□□□□ -0.85
HOXA1-201ENST00000343060 EGFLAMQ63HQ2 1017 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 SNRNP48Q6IEG0 339 aaKnown RBP9.76□□□□□ -0.85
HOXA1-201ENST00000343060 KCTD8Q6ZWB6 473 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 MFSD3Q96ES6 412 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 HPDLQ96IR7 371 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 FAM167AQ96KS9 214 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 MROQ9BYG7 248 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 SEZ6LQ9BYH1 1024 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 OSBPL2Q9H1P3 480 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.76□□□□□ -0.85
HOXA1-201ENST00000343060 SEPT3Q9UH03 358 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 ADAMTS5Q9UNA0 930 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 DHRS12A0PJE2 317 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 BBIP1A8MTZ0 92 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 GOLGA8TH3BQL2 631 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 J3QRK9 145 aa9.76□□□□□ -0.85
HOXA1-201ENST00000343060 UBDO15205 165 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms