RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 CMC1Q7Z7K0 106 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 C7orf61Q8IZ16 206 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 CARNMT1Q8N4J0 409 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 OTUD6BQ8N6M0 293 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 HERVK_113Q902F9 699 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 MGME1Q9BQP7 344 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 MUC3BQ9H195 1237 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 ARL2BPQ9Y2Y0 163 aa20.22■□□□□ 0.83
RTN1-202ENST00000342503 TIMM44O43615 452 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 GLRA3O75311 464 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 GJA1P17302 382 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 PAMP19021 973 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 DNAJB1P25685 340 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 KIAA0930Q6ICG6 404 aaPredicted RBP20.21■□□□□ 0.83
RTN1-202ENST00000342503 C16orf46Q6P387 395 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 CNTN4Q8IWV2 1026 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 ELMOD1Q8N336 334 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 CCDC63Q8NA47 563 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 HJURPQ8NCD3 748 aaPredicted RBP20.21■□□□□ 0.83
RTN1-202ENST00000342503 TTC16Q8NEE8 873 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 SLC22A17Q8WUG5 538 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 IFT43Q96FT9 208 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 THOC1Q96FV9 657 aaKnown RBP20.21■□□□□ 0.83
RTN1-202ENST00000342503 FEM1CQ96JP0 617 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 HAUS2Q9NVX0 235 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 DCDC2Q9UHG0 476 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 EMCNQ9ULC0 261 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 LZTS1Q9Y250 596 aa20.21■□□□□ 0.83
RTN1-202ENST00000342503 C2orf71A6NGG8 1288 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 H0Y626 953 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 CBX4O00257 560 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 GFRA2O00451 464 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 CCL16O15467 120 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 GLUD1P00367 558 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 CKMP06732 381 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 MYL4P12829 197 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 CORO7P57737 925 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 CDK18Q07002 472 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 RFTN1Q14699 578 aaPredicted RBP20.2■□□□□ 0.82
RTN1-202ENST00000342503 CYTH1Q15438 398 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 FSCBQ5H9T9 825 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 STXBP5Q5T5C0 1151 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 TSTD2Q5T7W7 516 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 KYAT3Q6YP21 454 aaKnown RBP20.2■□□□□ 0.82
RTN1-202ENST00000342503 CCT6BQ92526 530 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 VPS39Q96JC1 886 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 PSKH2Q96QS6 385 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 CORO1BQ9BR76 489 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 MECRQ9BV79 373 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 LSM7Q9UK45 103 aaKnown RBP20.2■□□□□ 0.82
RTN1-202ENST00000342503 IRAK3Q9Y616 596 aa20.2■□□□□ 0.82
RTN1-202ENST00000342503 HELZP42694 1942 aaKnown RBP20.19■□□□□ 0.82
RTN1-202ENST00000342503 A0A1W2PRU2 124 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 C1RP00736 705 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 SERPINF2P08697 491 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 RGRP47804 291 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 SLC7A9P82251 487 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 THOC5Q13769 683 aaKnown RBP20.19■□□□□ 0.82
RTN1-202ENST00000342503 N4BP2L1Q5TBK1 243 aaPredicted RBP20.19■□□□□ 0.82
RTN1-202ENST00000342503 ZNF783Q6ZMS7 281 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 FAM217AQ8IXS0 508 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 MRPL43Q8N983 215 aaKnown RBP20.19■□□□□ 0.82
RTN1-202ENST00000342503 ACVR1CQ8NER5 493 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 POF1BQ8WVV4 589 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 TMA16Q96EY4 203 aaKnown RBP20.19■□□□□ 0.82
RTN1-202ENST00000342503 CAB39LQ9H9S4 337 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 TRAV19A0A0A6YYK7 116 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 E2F8A0AVK6 867 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 SIN3BO75182 1162 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 LUC7L3O95232 432 aaKnown RBP20.19■□□□□ 0.82
RTN1-202ENST00000342503 MPOP05164 745 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 SYN1P17600 705 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 GABRB3P28472 473 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 CDC25CP30307 473 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 GMPRP36959 345 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 IRX4P78413 519 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 ARF5P84085 180 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 MPP1Q00013 466 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 CTBP1Q13363 440 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 GRM3Q14832 879 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 ZC3HC1Q86WB0 502 aaKnown RBP20.19■□□□□ 0.82
RTN1-202ENST00000342503 DENND6AQ8IWF6 608 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 PHOSPHO2Q8TCD6 241 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 SPPL3Q8TCT6 385 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 NSMCE3Q96MG7 304 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 GCNAQ96QF7 691 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 TSSK1BQ9BXA7 367 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 KDM4CQ9H3R0 1056 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 RHOJQ9H4E5 214 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 NOD2Q9HC29 1040 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 CFAP97Q9P2B7 532 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 GGT7Q9UJ14 662 aa20.19■□□□□ 0.82
RTN1-202ENST00000342503 TYW5A2RUC4 315 aaKnown RBP20.18■□□□□ 0.82
RTN1-202ENST00000342503 KLF11O14901 512 aa20.18■□□□□ 0.82
RTN1-202ENST00000342503 PAPSS2O95340 614 aaPredicted RBP20.18■□□□□ 0.82
RTN1-202ENST00000342503 AHSGP02765 367 aa20.18■□□□□ 0.82
RTN1-202ENST00000342503 FGF1P05230 155 aa20.18■□□□□ 0.82
RTN1-202ENST00000342503 BPGMP07738 259 aa20.18■□□□□ 0.82
RTN1-202ENST00000342503 HLA-DPA1P20036 260 aa20.18■□□□□ 0.82
RTN1-202ENST00000342503 MZF1P28698 734 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms