RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 SH2D3CQ8N5H7 860 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 KCTD6Q8NC69 237 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 CHST14Q8NCH0 376 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 ZCCHC14Q8WYQ9 949 aaKnown RBP11.82□□□□□ -0.52
TREM2-201ENST00000338469 KRT35Q92764 455 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 VOPP1Q96AW1 172 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 HES6Q96HZ4 224 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 C1orf74Q96LT6 269 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 C16orf45Q96MC5 204 aaPredicted RBP11.82□□□□□ -0.52
TREM2-201ENST00000338469 KCTD15Q96SI1 283 aaPredicted RBP11.82□□□□□ -0.52
TREM2-201ENST00000338469 KLHL11Q9NVR0 708 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 OR12D3Q9UGF7 316 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 FZD4Q9ULV1 537 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 SCML1Q9UN30 329 aa11.82□□□□□ -0.52
TREM2-201ENST00000338469 ANKRD11Q6UB99 2663 aaPredicted RBP11.82□□□□□ -0.52
TREM2-201ENST00000338469 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 A0A1B0GTQ1 180 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 LRRD1A4D1F6 860 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 DDX3YO15523 660 aaKnown RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 CREB3O43889 395 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 RNASEH1O60930 286 aaKnown RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 SRGAP2O75044 1071 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 TRIM16O95361 564 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 SRCP12931 536 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 MAT2AP31153 395 aaKnown RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 L1CAMP32004 1257 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 ARL4AP40617 200 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 CCR5P51681 352 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 ZNF135P52742 658 aaPredicted RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 CDH6P55285 790 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 RWDD2BP57060 319 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 NRG1Q02297 640 aaPredicted RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 BNIP3Q12983 259 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 ZNF177Q13360 481 aaPredicted RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 ELAVL3Q14576 367 aaKnown RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 PDK2Q15119 407 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 DPYSL2Q16555 572 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 RABGAP1LQ5R372 815 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 AGBL4Q5VU57 503 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 LRRC31Q6UY01 552 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 LINGO4Q6UY18 593 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 MAP7D3Q8IWC1 876 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 CCDC117Q8IWD4 279 aaPredicted RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 OR7D4Q8NG98 312 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 ARRDC3Q96B67 414 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D31Q96DN5 1066 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 RBM41Q96IZ5 413 aaKnown RBP11.81□□□□□ -0.52
TREM2-201ENST00000338469 EPAS1Q99814 870 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 PCDH18Q9HCL0 1135 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 NDFIP2Q9NV92 336 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 VPS51Q9UID3 782 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 ITPR1Q14643 2758 aa11.81□□□□□ -0.52
TREM2-201ENST00000338469 APC2O95996 2303 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 IGLV3-10A0A075B6K4 115 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D3DA0A087WVF3 549 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D3IA0A087WXS9 549 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D3EA0A087X179 549 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D3KA0A087X1G2 549 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 FAM149AA5PLN7 773 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D3FA6NER0 549 aaPredicted RBP11.8□□□□□ -0.52
TREM2-201ENST00000338469 LRRC72A6NJI9 287 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D3LB9A6J9 549 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 E9PAM4 449 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 FAM72CH0Y354 149 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 H3BRJ5 948 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 EEF2KO00418 725 aaKnown RBP11.8□□□□□ -0.52
TREM2-201ENST00000338469 ENC1O14682 589 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 FLRT2O43155 660 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 LATO43561 262 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 BNIP3LO60238 219 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 PCDHGA12O60330 932 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 CLDN11O75508 207 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 ZMPSTE24O75844 475 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 ZRANB2O95218 330 aaKnown RBP eCLIP11.8□□□□□ -0.52
TREM2-201ENST00000338469 CD160O95971 181 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 ADH1BP00325 375 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D3HP0C7X1 549 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 KDELR1P24390 212 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 CD38P28907 300 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 HTR7P34969 479 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 CETN2P41208 172 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 PEX5P50542 639 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 CDH4P55283 916 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TPI1P60174 286 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 ETF1P62495 437 aaKnown RBP11.8□□□□□ -0.52
TREM2-201ENST00000338469 SULT2A1Q06520 285 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 DPYSL3Q14195 570 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TEAD4Q15561 434 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 ACCSLQ4AC99 568 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 PIP5KL1Q5T9C9 394 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 FAM72AQ5TYM5 149 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TTC39BQ5VTQ0 682 aaPredicted RBP11.8□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D3GQ6DHY5 549 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TBC1D3CQ6IPX1 549 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 FAM72DQ6L9T8 149 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 KANSL1Q7Z3B3 1105 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 TFAP2DQ7Z6R9 452 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 FAM72BQ86X60 149 aa11.8□□□□□ -0.52
TREM2-201ENST00000338469 CCDC50Q8IVM0 306 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms