RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 SNRNP27Q8WVK2 155 aaKnown RBP16.91■□□□□ 0.3
SSH1-201ENST00000326470 BRD8Q9H0E9 1235 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 MRPL46Q9H2W6 279 aaKnown RBP16.91■□□□□ 0.3
SSH1-201ENST00000326470 STAP1Q9ULZ2 295 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 A0A087WXM4 84 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 AP3B1O00203 1094 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 BMP2P12643 396 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 CKMT2P17540 419 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 GNL1P36915 607 aaPredicted RBP16.91■□□□□ 0.3
SSH1-201ENST00000326470 DNAJB13P59910 316 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 SFSWAPQ12872 951 aaKnown RBP16.91■□□□□ 0.3
SSH1-201ENST00000326470 ZNF460Q14592 562 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 UGP2Q16851 508 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 SAMD4BQ5PRF9 694 aaKnown RBP16.91■□□□□ 0.3
SSH1-201ENST00000326470 GPR141Q7Z602 305 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 PIGZQ86VD9 579 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 CEP97Q8IW35 865 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 SMYD1Q8NB12 490 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 TXNDC5Q8NBS9 432 aaKnown RBP16.91■□□□□ 0.3
SSH1-201ENST00000326470 PPWD1Q96BP3 646 aaKnown RBP16.91■□□□□ 0.3
SSH1-201ENST00000326470 FAR2Q96K12 515 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 PIGVQ9NUD9 493 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 GTSE1Q9NYZ3 720 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 TMEM181Q9P2C4 612 aa16.91■□□□□ 0.3
SSH1-201ENST00000326470 PTBP2Q9UKA9 531 aaKnown RBP16.91■□□□□ 0.3
SSH1-201ENST00000326470 ZNF638Q14966 1978 aaKnown RBP16.91■□□□□ 0.3
SSH1-201ENST00000326470 ZSWIM8A7E2V4 1837 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 STMN1P16949 149 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 TPP2P29144 1249 aaPredicted RBP16.9■□□□□ 0.3
SSH1-201ENST00000326470 EPHX2P34913 555 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 ENTPD1P49961 510 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 ESRRGP62508 458 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 PRKCQQ04759 706 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 ZBED5Q49AG3 693 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 AGKQ53H12 422 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 GPR180Q86V85 440 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
SSH1-201ENST00000326470 BEST2Q8NFU1 509 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 ADAMTS16Q8TE57 1224 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 WNT8BQ93098 351 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 ISOC1Q96CN7 298 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 MRPL57Q9BQC6 102 aaKnown RBP16.9■□□□□ 0.3
SSH1-201ENST00000326470 SNX25Q9H3E2 840 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 CCDC78A2IDD5 438 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 SOCS2O14508 198 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 UBDO15205 165 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 PGK2P07205 417 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 HDCP19113 662 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 DNAJB2P25686 324 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 ADRA1BP35368 520 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 NOL9Q5SY16 702 aaKnown RBP16.9■□□□□ 0.3
SSH1-201ENST00000326470 SYPL2Q5VXT5 272 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 C9orf57Q5W0N0 161 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 NAPEPLDQ6IQ20 393 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 FAM45BPQ6NSW5 357 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 C8orf82Q6P1X6 216 aaPredicted RBP16.9■□□□□ 0.3
SSH1-201ENST00000326470 CLVS1Q8IUQ0 354 aaPredicted RBP16.9■□□□□ 0.3
SSH1-201ENST00000326470 CNTN4Q8IWV2 1026 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 SPATA6LQ8N4H0 392 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 LZTR1Q8N653 840 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 NPWQ8N729 165 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 FAM45AQ8TCE6 357 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 C18orf25Q96B23 403 aaPredicted RBP16.9■□□□□ 0.3
SSH1-201ENST00000326470 HDAC11Q96DB2 347 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 VAT1Q99536 393 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 OSBPL2Q9H1P3 480 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 POMKQ9H5K3 350 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 MEAF6Q9HAF1 191 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 ARMC1Q9NVT9 282 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 CCDC167Q9P0B6 97 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 EBF1Q9UH73 591 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 PLXNA1Q9UIW2 1896 aa16.9■□□□□ 0.3
SSH1-201ENST00000326470 FAM95CA0A1B0GW59 222 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 TIPRLO75663 272 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 SNRPB2P08579 225 aaKnown RBP16.89■□□□□ 0.29
SSH1-201ENST00000326470 TXNP10599 105 aaKnown RBP16.89■□□□□ 0.29
SSH1-201ENST00000326470 HNRNPLP14866 589 aaKnown RBP eCLIP16.89■□□□□ 0.29
SSH1-201ENST00000326470 ATP5F1P24539 256 aaPredicted RBP16.89■□□□□ 0.29
SSH1-201ENST00000326470 SEMA3BQ13214 749 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 PSMD5Q16401 504 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 MFSD6LQ8IWD5 586 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 SNX27Q96L92 541 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 SLC9A7Q96T83 725 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 SNTG2Q9NY99 539 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 UBP1Q9NZI7 540 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 CROTQ9UKG9 612 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 MRASO14807 208 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 TKTP29401 623 aaKnown RBP16.89■□□□□ 0.29
SSH1-201ENST00000326470 TPI1P60174 286 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 MPP1Q00013 466 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 DCAF4L1Q3SXM0 396 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 INTS6LQ5JSJ4 861 aaKnown RBP16.89■□□□□ 0.29
SSH1-201ENST00000326470 ELMSAN1Q6PJG2 1045 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 HACD2Q6Y1H2 254 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 ERMP1Q7Z2K6 904 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 PATL1Q86TB9 770 aaKnown RBP16.89■□□□□ 0.29
SSH1-201ENST00000326470 DHFR2Q86XF0 187 aa16.89■□□□□ 0.29
SSH1-201ENST00000326470 DENND6AQ8IWF6 608 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms