RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 ABHD16BQ9H3Z7 469 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 ERGIC3Q9Y282 383 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 E9PCH4 1651 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 CHD1O14646 1710 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 QSOX1O00391 747 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 ZNF540Q8NDQ6 660 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 KAZALD1Q96I82 304 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 PNPLA3Q9NST1 481 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 SYNPO2Q9UMS6 1093 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 C2CD2Q9Y426 696 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 COMMD3-BMI1R4GMX3 469 aa21.22■□□□□ 0.99
RNF40-201ENST00000324685 MTRF1O75570 445 aaKnown RBP21.21■□□□□ 0.99
RNF40-201ENST00000324685 ATP5C1P36542 298 aaKnown RBP21.21■□□□□ 0.99
RNF40-201ENST00000324685 NAGLUP54802 743 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 BTG3Q14201 252 aaPredicted RBP21.21■□□□□ 0.99
RNF40-201ENST00000324685 PAGE2Q7Z2X7 111 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 ZC3H7AQ8IWR0 971 aaKnown RBP21.21■□□□□ 0.99
RNF40-201ENST00000324685 NUDT5Q9UKK9 219 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 SH3BGRLO75368 114 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 SNRPD1P62314 119 aaKnown RBP21.21■□□□□ 0.99
RNF40-201ENST00000324685 MARK2Q7KZI7 788 aaKnown RBP21.21■□□□□ 0.99
RNF40-201ENST00000324685 PROSER1Q86XN7 944 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 SENP8Q96LD8 212 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 HSFY1Q96LI6 401 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 OSBPL11Q9BXB4 747 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 PEX11AO75192 247 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 CCNIQ14094 377 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 ALG11Q2TAA5 492 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 SMYD1Q8NB12 490 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 CXorf40AQ8TE69 158 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 PLEKHG4BQ96PX9 1271 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 ASB8Q9H765 288 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 TBC1D30Q9Y2I9 924 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 LMTK2Q8IWU2 1503 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 AHCYL1O43865 530 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 HOXB6P17509 224 aaKnown RBP21.21■□□□□ 0.99
RNF40-201ENST00000324685 RPL5P46777 297 aaKnown RBP21.21■□□□□ 0.99
RNF40-201ENST00000324685 TRIM32Q13049 653 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 FOXR1Q6PIV2 292 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 SH3RF1Q7Z6J0 888 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 COLGALT2Q8IYK4 626 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 SCAIQ8N9R8 606 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 MTMR9Q96QG7 549 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 TINF2Q9BSI4 451 aa21.21■□□□□ 0.99
RNF40-201ENST00000324685 RSL24D1Q9UHA3 163 aaKnown RBP21.21■□□□□ 0.99
RNF40-201ENST00000324685 NPR3P17342 541 aa21.2■□□□□ 0.99
RNF40-201ENST00000324685 RPL22P35268 128 aaKnown RBP21.2■□□□□ 0.99
RNF40-201ENST00000324685 UGT2B15P54855 530 aa21.2■□□□□ 0.99
RNF40-201ENST00000324685 LIN54Q6MZP7 749 aa21.2■□□□□ 0.99
RNF40-201ENST00000324685 PIWIL4Q7Z3Z4 852 aaKnown RBP21.2■□□□□ 0.99
RNF40-201ENST00000324685 HIPK1Q86Z02 1210 aa21.2■□□□□ 0.99
RNF40-201ENST00000324685 AP3S1Q92572 193 aa21.2■□□□□ 0.99
RNF40-201ENST00000324685 PTGFRNQ9P2B2 879 aa21.2■□□□□ 0.99
RNF40-201ENST00000324685 LRRC10BA6NIK2 292 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 ERBB2P04626 1255 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 MTAPQ13126 283 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 TRAPPC12Q8WVT3 735 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 SOCS4Q8WXH5 440 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 KAT5Q92993 513 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 RNF157Q96PX1 679 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 ZNF670Q9BS34 389 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 NWD1Q149M9 1564 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 EML1O00423 815 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 TAL1P17542 331 aaPredicted RBP21.2■□□□□ 0.98
RNF40-201ENST00000324685 TGFBR2P37173 567 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 TGFB2P61812 414 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 RHAGQ02094 409 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 TRAP1Q12931 704 aaKnown RBP21.2■□□□□ 0.98
RNF40-201ENST00000324685 C15orf59Q2T9L4 293 aaPredicted RBP21.2■□□□□ 0.98
RNF40-201ENST00000324685 AAGABQ6PD74 315 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 CD101Q93033 1021 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 N6AMT1Q9Y5N5 214 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 ZNF37AP17032 561 aaPredicted RBP21.2■□□□□ 0.98
RNF40-201ENST00000324685 GABRB2P47870 512 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 LIPMQ5VYY2 423 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 C1orf186Q6ZWK4 172 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 CHPFQ8IZ52 775 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 SUSD6Q92537 303 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 DNAJC1Q96KC8 554 aaKnown RBP21.2■□□□□ 0.98
RNF40-201ENST00000324685 TCF12Q99081 682 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 TBC1D10AQ9BXI6 508 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 CCNB1IP1Q9NPC3 277 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 TOR4AQ9NXH8 423 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 SLC12A4Q9UP95 1085 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 ULK1O75385 1050 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 NUDT17P0C025 328 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 ATN1P54259 1190 aaPredicted RBP21.2■□□□□ 0.98
RNF40-201ENST00000324685 RFX4Q33E94 735 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 AADACL2Q6P093 401 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 GPRIN3Q6ZVF9 776 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 CSGALNACT1Q8TDX6 532 aa21.2■□□□□ 0.98
RNF40-201ENST00000324685 RGL2O15211 777 aa21.19■□□□□ 0.98
RNF40-201ENST00000324685 OTCP00480 354 aa21.19■□□□□ 0.98
RNF40-201ENST00000324685 EPORP19235 508 aa21.19■□□□□ 0.98
RNF40-201ENST00000324685 XIAPP98170 497 aa21.19■□□□□ 0.98
RNF40-201ENST00000324685 PYDC2Q56P42 97 aa21.19■□□□□ 0.98
RNF40-201ENST00000324685 GCNT7Q6ZNI0 430 aa21.19■□□□□ 0.98
RNF40-201ENST00000324685 RECQL4O94761 1208 aa21.19■□□□□ 0.98
RNF40-201ENST00000324685 FTH1P02794 183 aa21.19■□□□□ 0.98
RNF40-201ENST00000324685 TFEBP19484 476 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms