RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 VDRP11473 427 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 LMO2P25791 158 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 CTBP1Q13363 440 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 IKBKEQ14164 716 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 POTEHQ6S545 545 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 TMEM151AQ8N4L1 468 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 USP33Q8TEY7 942 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 FAM149B1Q96BN6 582 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 FTHL17Q9BXU8 183 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 INIPQ9NRY2 104 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 HTTP42858 3142 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 SIP14410 1827 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 USP34Q70CQ2 3546 aa12.32□□□□□ -0.44
SEC24A-201ENST00000322887 A0A087WZ62 844 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 ARHGAP10A1A4S6 786 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 J3QRK9 145 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 C22orf31O95567 290 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 IMPDH2P12268 514 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 NR1H2P55055 460 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 MPP1Q00013 466 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 PDAP1Q13442 181 aaKnown RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 GRIK4Q16099 956 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 C1orf53Q5VUE5 145 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 EFCAB12Q6NXP0 572 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 MFSD6LQ8IWD5 586 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 ZBTB8OSQ8IWT0 167 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 C18orf25Q96B23 403 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 FBXL8Q96CD0 374 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 FDXACB1Q9BRP7 624 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 ZNF670Q9BS34 389 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 ILKAPQ9H0C8 392 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 Q9H521 79 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 FBRSL1Q9HCM7 1045 aaKnown RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 TRPC7Q9HCX4 862 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 RUVBL2Q9Y230 463 aaKnown RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 PTGDR2Q9Y5Y4 395 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 V9GYQ6 96 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 SHROOM3Q8TF72 1996 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 CITO14578 2027 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 ZCWPW2A0A1B0GU75 182 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 A0A1W2PQ45 241 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 A0A1W2PQY0 241 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 AURKAO14965 403 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 ATE1O95260 518 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 PPARGP37231 505 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 CXCR3P49682 368 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 NDUFV1P49821 464 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 MNX1P50219 401 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 RPL14P50914 215 aaKnown RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 MBTD1Q05BQ5 628 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 CEP97Q8IW35 865 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 ZNF786Q8N393 782 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 LINC01465Q8N7H1 131 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 MIPOL1Q8TD10 442 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 LPGAT1Q92604 370 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 RRN3Q9NYV6 651 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 GTSE1Q9NYZ3 720 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 XPR1Q9UBH6 696 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 CACNG4Q9UBN1 327 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 EGFL7Q9UHF1 273 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 GTF2IRD1Q9UHL9 959 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 I6L893 689 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 HDAC3O15379 428 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 BCAS2O75934 225 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 POLBP06746 335 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 COL6A1P12109 1028 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 PROZP22891 400 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 GABRB3P28472 473 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 SH2D4BQ5SQS7 431 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 KRT80Q6KB66 452 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 CNSTQ6PJW8 725 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 LCLAT1Q6UWP7 414 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 C16orf89Q6UX73 402 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 FIBCD1Q8N539 461 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 FBXL20Q96IG2 436 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 VPS39Q96JC1 886 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 ZFRQ96KR1 1074 aaKnown RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 RANBP9Q96S59 729 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 GCOM2Q9BZD3 368 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 OXSMQ9NWU1 459 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 KLHL8Q9P2G9 620 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 BARX2Q9UMQ3 279 aaPredicted RBP12.31□□□□□ -0.44
SEC24A-201ENST00000322887 PCDHGA7Q9Y5G6 932 aa12.31□□□□□ -0.44
SEC24A-201ENST00000322887 FBP2O00757 339 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 DLX3O60479 287 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 CHRM3P20309 590 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 KCNA5P22460 613 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 YWHAQP27348 245 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 RXRGP48443 463 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 AP3M2P53677 418 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 CDC42EP1Q00587 391 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 NSUN2Q08J23 767 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEC24A-201ENST00000322887 CBX3Q13185 183 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 ATP1A4Q13733 1029 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 TSTD2Q5T7W7 516 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 PIGZQ86VD9 579 aa12.3□□□□□ -0.44
SEC24A-201ENST00000322887 FSTL5Q8N475 847 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms