RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 HSPA14Q0VDF9 509 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 DNASE1L3Q13609 305 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 MORF4L2Q15014 288 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 SPRYD7Q5W111 196 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 HS6ST3Q8IZP7 471 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 CATSPER1Q8NEC5 780 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 DDI1Q8WTU0 396 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 CCDC120Q96HB5 630 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 TRIM55Q9BYV6 548 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 UNKQ9C0B0 810 aaKnown RBP9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 DDX28Q9NUL7 540 aaKnown RBP9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 ARMCX1Q9P291 453 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 USP18Q9UMW8 372 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 NR2E3Q9Y5X4 410 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 USP3Q9Y6I4 520 aa9.65□□□□□ -0.87
RBFOX1-201ENST00000311745 C2orf81A6NN90 581 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 CST8O60676 142 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 ALX3O95076 343 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 TNFAIP8O95379 198 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 KRT6AP02538 564 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 KRT6BP04259 564 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 RARBP10826 455 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 GTF2A2P52657 109 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 RACK1P63244 317 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 GPS1Q13098 491 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 LDLRAP1Q5SW96 308 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 KIAA0319Q5VV43 1072 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 SNX29P2Q8IUI4 249 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 GOT1L1Q8NHS2 421 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 CENPIQ92674 756 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 RTP4Q96DX8 246 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 MAGEB18Q96M61 343 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 CFAP57Q96MR6 1250 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 B3GNT5Q9BYG0 378 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 RNF112Q9ULX5 631 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 NOSIPQ9Y314 301 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 DERAQ9Y315 318 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 A0A1W2PQ72 361 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 MUSKO15146 869 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 MED7O43513 233 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 CD19P15391 556 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 MX2P20592 715 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 LMO2P25791 158 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 HNRNPFP52597 415 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 KCNJ11Q14654 390 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 CCL14Q16627 93 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 PPP1R3AQ16821 1122 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 FAM110CQ1W6H9 321 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 PLA2G4EQ3MJ16 856 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 HP1BP3Q5SSJ5 553 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 ARTNQ5T4W7 220 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 C9orf57Q5W0N0 161 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 METTL2BQ6P1Q9 378 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 DCUN1D2Q6PH85 259 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 DHDDSQ86SQ9 333 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 TRABD2AQ86V40 505 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 SMG8Q8ND04 991 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 ABCG4Q9H172 646 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 Q9H521 79 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 FAM124BQ9H5Z6 455 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 HEY2Q9UBP5 337 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 AP3M1Q9Y2T2 418 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 SNX8Q9Y5X2 465 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 TRAV6A0A075B6T7 132 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 A8MXQ7 604 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 POC1B-GALNT4F8VUJ3 575 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 STMND1H3BQB6 276 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 AMHP03971 560 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 CDK9P50750 372 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 BMXP51813 675 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 ATXN1P54253 815 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 EPHB1P54762 984 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 GPR85P60893 370 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 POLR2GP62487 172 aaKnown RBP eCLIP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 CHRNEQ04844 493 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 SNTA1Q13424 505 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 NOMO1Q15155 1222 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 LYPD8Q6UX82 237 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 SPATA18Q8TC71 538 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 RXFP2Q8WXD0 754 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 SDCCAG3Q96C92 435 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 MRRFQ96E11 262 aaKnown RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 GHITMQ9H3K2 345 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 FBXO6Q9NRD1 293 aaPredicted RBP9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 ARMC1Q9NVT9 282 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 DTNAQ9Y4J8 743 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 UGT2A1Q9Y4X1 527 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 SQORQ9Y6N5 450 aa9.64□□□□□ -0.87
RBFOX1-201ENST00000311745 HOXC11O43248 304 aaPredicted RBP9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 TYROBPO43914 113 aa9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 PIAS1O75925 651 aa9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 TP53P04637 393 aaPredicted RBP9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 DARSP14868 501 aaKnown RBP9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 LRPAP1P30533 357 aa9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 DYNLT1P63172 113 aa9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 SLC10A2Q12908 348 aaPredicted RBP9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 MAPK11Q15759 364 aa9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 GOLGA7BQ2TAP0 167 aa9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 FAM214AQ32MH5 1076 aa9.63□□□□□ -0.87
RBFOX1-201ENST00000311745 SLC45A4Q5BKX6 768 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms