RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 NSMCE3Q96MG7 304 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CBWD1Q9BRT8 395 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SPATA9Q9BWV2 254 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 EXO5Q9H790 373 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SDHAF3Q9NRP4 125 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SRRDQ9UH36 339 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 HPSEQ9Y251 543 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TRAFD1O14545 582 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ARP10275 920 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 IDO1P14902 403 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 OXTRP30559 389 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RPS6KA3P51812 740 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ZSWIM7Q19AV6 140 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RFX4Q33E94 735 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TCHHL1Q5QJ38 904 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 STXBP5Q5T5C0 1151 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FAM71AQ8IYT1 594 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MCOLN2Q8IZK6 566 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DEPDC4Q8N2C3 294 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FAM71DQ8N9W8 422 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ACTL9Q8TC94 416 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PXYLP1Q8TE99 480 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PTCD3Q96EY7 689 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MSANTD3Q96H12 275 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 UNC93B1Q9H1C4 597 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 C11orf49Q9H6J7 331 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SMYD3Q9H7B4 428 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ITM2CQ9NQX7 267 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CREBZFQ9NS37 354 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 SIK3Q9Y2K2 1263 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 NDUFAF1Q9Y375 327 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ADAMTSL3P82987 1691 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 COL2A1P02458 1487 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TOPAZ1Q8N9V7 1692 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 BCLAF3A2AJT9 711 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PI15O43692 258 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ULK1O75385 1050 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MFN2O95140 757 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 NUDT14O95848 222 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 GYPCP04921 128 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FGRP09769 529 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 YBX3P16989 372 aaKnown RBP eCLIP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TYMPP19971 482 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 BDNFP23560 247 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ARRB1P49407 418 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CDH4P55283 916 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RAB14P61106 215 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CCZ1BP86790 482 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CCZ1P86791 482 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 DGKZQ13574 1117 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 RAET1GQ6H3X3 334 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 HDDC2Q7Z4H3 204 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF527Q8NB42 609 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 BHLHE22Q8NFJ8 381 aaPredicted RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 OVCA2Q8WZ82 227 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 FOXJ1Q92949 421 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 MRPL57Q9BQC6 102 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 TCF7L2Q9NQB0 619 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 PLIN4Q96Q06 1357 aa3.22□□□□□ -1.89
CLOCK-201ENST00000309964 ZNFX1Q9P2E3 1918 aaKnown RBP3.22□□□□□ -1.89
CLOCK-201ENST00000309964 CCDC154A6NI56 674 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 BTNL10A8MVZ5 291 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 TNFRSF10BO14763 440 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 UBDO15205 165 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 SLC37A4O43826 429 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 SNAPC5O75971 98 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 MICAL2O94851 1124 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 SRPRAP08240 638 aaKnown RBP3.21□□□□□ -1.89
CLOCK-201ENST00000309964 AGXTP21549 392 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 WEE1P30291 646 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 MRPS35P82673 323 aaKnown RBP3.21□□□□□ -1.89
CLOCK-201ENST00000309964 KCNMA1Q12791 1236 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 CRHR2Q13324 411 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 SNTA1Q13424 505 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 KYNUQ16719 465 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 DPY19L1Q2PZI1 675 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 SMTNL2Q2TAL5 461 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 PUS10Q3MIT2 529 aaKnown RBP3.21□□□□□ -1.89
CLOCK-201ENST00000309964 EMC10Q5UCC4 262 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 C1orf186Q6ZWK4 172 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 FAM131BQ86XD5 332 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 TDRD5Q8NAT2 981 aaKnown RBP3.21□□□□□ -1.89
CLOCK-201ENST00000309964 FNDC5Q8NAU1 212 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 NSL1Q96IY1 281 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 CNDP1Q96KN2 507 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 NSMCE2Q96MF7 247 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 PPP1R10Q96QC0 940 aaKnown RBP3.21□□□□□ -1.89
CLOCK-201ENST00000309964 SLC25A23Q9BV35 468 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 ANLNQ9NQW6 1124 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 CLIC5Q9NZA1 410 aa3.21□□□□□ -1.89
CLOCK-201ENST00000309964 NPHP3-ACAD11A0A0J9YXS1 232 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 DUXAA6NLW8 204 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 RNF103O00237 685 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SLC25A14O95258 325 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 TRUB2O95900 331 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 CCNA2P20248 432 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ADSLP30566 484 aaPredicted RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 SP2Q02086 613 aa3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ALDH6A1Q02252 535 aaKnown RBP3.21□□□□□ -1.9
CLOCK-201ENST00000309964 ST3GAL1Q11201 340 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms