RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TGFB1I1O43294 461 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SGTAO43765 313 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 IFNA14P01570 189 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SSTR1P30872 391 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 PRKAG1P54619 331 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 RBM43Q6ZSC3 357 aaKnown RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 HID1Q8IV36 788 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 BEND7Q8N7W2 519 aaPredicted RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 LGMNQ99538 433 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC38A3Q99624 504 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 RABGEF1Q9UJ41 708 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 A0A096LPK6 155 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 CCDC189A1A4V9 331 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 AVILO75366 819 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 CCNDBP1O95273 360 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 ZSCAN5DPP0CG00 497 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 FOSL2P15408 326 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 AIF1P55008 147 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 CDH4P55283 916 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 PFKFB4Q16877 469 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 CDK20Q8IZL9 346 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 CNDP1Q96KN2 507 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 NKX2-4Q9H2Z4 354 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 KLRC4O43908 158 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SNAI1O95863 264 aaPredicted RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 CYP1A1P04798 512 aaPredicted RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 SKIV2L2P42285 1042 aaKnown RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 NOMO3P69849 1222 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 MTMR8Q96EF0 704 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 AGO3Q9H9G7 860 aaKnown RBP10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 IL23AQ9NPF7 189 aa10.8□□□□□ -0.68
SYNPO2-201ENST00000307142 KRT33AO76009 404 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 DDX6P26196 483 aaKnown RBP eCLIP10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC1A6P48664 564 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 LCLAT1Q6UWP7 414 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 KLHL23Q8NBE8 558 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 CATSPER1Q8NEC5 780 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SETD7Q8WTS6 366 aaKnown RBP10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 EPN3Q9H201 632 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 LHX5Q9H2C1 402 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 ALG9Q9H6U8 611 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 ASB3Q9Y575 518 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 INAVAQ3KP66 663 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 XKR6Q5GH73 641 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 VN1R5Q7Z5H4 357 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SYT12Q8IV01 421 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 MORF4L1Q9UBU8 362 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 C10orf71Q711Q0 1435 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 CPA2P48052 419 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 RAD23BP54727 409 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 FUT2Q10981 343 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 BMT2Q1RMZ1 405 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 LRRC36Q1X8D7 754 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 ATP13A4Q4VNC1 1196 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 CELF5Q8N6W0 485 aaKnown RBP10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 TPD52L3Q96J77 140 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 FCF1Q9Y324 198 aaKnown RBP10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 HNRNPRO43390 633 aaKnown RBP10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 KCNA5P22460 613 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC10A6Q3KNW5 377 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 OR4L1Q8NH43 312 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SHC3Q92529 594 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 TIFAQ96CG3 184 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SH3GL1Q99961 368 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 RERGLQ9H628 205 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 IMPAD1Q9NX62 359 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 CD3EAPO15446 510 aaKnown RBP10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 UMPSP11172 480 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 ABCG1P45844 678 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 IRF8Q02556 426 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 REXO1L1PQ8IX06 675 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 KLQ9UEF7 1012 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SNX6Q9UNH7 406 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 RAI2Q9Y5P3 530 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 CHADO15335 359 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SH3BGRP55822 239 aaPredicted RBP10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 KCNMA1Q12791 1236 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 EME1Q96AY2 570 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SEMA4BQ9NPR2 832 aaPredicted RBP10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 SIK3Q9Y2K2 1263 aa10.79□□□□□ -0.68
SYNPO2-201ENST00000307142 RGPD1P0DJD0 1748 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 A0A1B0GVM2 712 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 TCAF2A6NFQ2 919 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 B2RBV5 119 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 E9PBE3 544 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 KLHL41O60662 606 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 ATG13O75143 517 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 NOS3P29474 1203 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 COPAP53621 1224 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 CDK18Q07002 472 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 EOGTQ5NDL2 527 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 STRADAQ7RTN6 431 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 RBFAQ8N0V3 343 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 LEMD2Q8NC56 503 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 STOML1Q9UBI4 398 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 ATP6V1HQ9UI12 483 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 SLCO1B7G3V0H7 640 aa10.78□□□□□ -0.68
SYNPO2-201ENST00000307142 GSNP06396 782 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms