RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 HPCAL1P37235 193 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 NAMPTP43490 491 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 PCDH1Q08174 1060 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 CPSF6Q16630 551 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP38-201ENST00000307017 CACNG4Q9UBN1 327 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 TIMM8BQ9Y5J9 83 aaPredicted RBP12.74□□□□□ -0.37
USP38-201ENST00000307017 LOC110117498-PIK3R3F6TDL0 507 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 PCBP2Q15366 365 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP38-201ENST00000307017 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.74□□□□□ -0.37
USP38-201ENST00000307017 HLA-DQA1Q5Y7H0 255 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 CLEC6AQ6EIG7 209 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 DYRK3O43781 588 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 STATHP02808 62 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 WARSP23381 471 aaKnown RBP12.74□□□□□ -0.37
USP38-201ENST00000307017 MPSTP25325 297 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 CAP2P40123 477 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 OMPP47874 163 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 RPL14P50914 215 aaKnown RBP12.74□□□□□ -0.37
USP38-201ENST00000307017 PRKAA1Q13131 559 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 SLC34A3Q8N130 599 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 ZNF354BQ96LW1 612 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 TBX5Q99593 518 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 SYT15Q9BQS2 421 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 COLEC11Q9BWP8 271 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 DDX4Q9NQI0 724 aaKnown RBP12.74□□□□□ -0.37
USP38-201ENST00000307017 PRDM4Q9UKN5 801 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 SNX10Q9Y5X0 201 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 INSRRP14616 1297 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 VCLP18206 1134 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 RCVRNP35243 200 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 DNASE1L3Q13609 305 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 PTCHD4Q6ZW05 846 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 ILDR1Q86SU0 546 aaPredicted RBP12.74□□□□□ -0.37
USP38-201ENST00000307017 HERC6Q8IVU3 1022 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 ZHX1-C8orf76Q96EF9 292 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 ZFRQ96KR1 1074 aaKnown RBP12.74□□□□□ -0.37
USP38-201ENST00000307017 ANKRD27Q96NW4 1050 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 C11orf16Q9NQ32 467 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 C8orf4Q9NR00 106 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 COMMD9Q9P000 198 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 PRR5-ARHGAP8B1AHC4 643 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 SEPT4O43236 478 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 NOBOXO60393 691 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 ARHGAP8P85298 464 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 FBXO47Q5MNV8 452 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 ZNF697Q5TEC3 545 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 PCDH9Q9HC56 1237 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 RPRD1BQ9NQG5 326 aaKnown RBP12.74□□□□□ -0.37
USP38-201ENST00000307017 TBC1D13Q9NVG8 400 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 SPG21Q9NZD8 308 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 TUBGCP4Q9UGJ1 667 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 MYO3AQ8NEV4 1616 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 KPNA6O60684 536 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 ITPKAP23677 461 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 NT5C2P49902 561 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 EPHB3P54753 998 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 NRG3P56975 720 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 GRIK4Q16099 956 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 XKR6Q5GH73 641 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 PPM1JQ5JR12 505 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 DUSP9Q99956 384 aaKnown RBP12.74□□□□□ -0.37
USP38-201ENST00000307017 TAS2R13Q9NYV9 303 aa12.74□□□□□ -0.37
USP38-201ENST00000307017 SLC28A2O43868 658 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 S100A9P06702 114 aaKnown RBP12.73□□□□□ -0.37
USP38-201ENST00000307017 C4BPBP20851 252 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 ATP5F1P24539 256 aaPredicted RBP12.73□□□□□ -0.37
USP38-201ENST00000307017 OSCP1Q8WVF1 389 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 ULBP1Q9BZM6 244 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 CEP152O94986 1710 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 E7ENX8 843 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 FCGR1AP12314 374 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 GP5P40197 560 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 PGM5Q15124 567 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 OVOS1Q6IE37 1185 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 RASAL3Q86YV0 1011 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 OR8H3Q8N146 312 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 DNAJA3Q96EY1 480 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 FERD3LQ96RJ6 166 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 PARK7Q99497 189 aaKnown RBP12.73□□□□□ -0.37
USP38-201ENST00000307017 EBPLQ9BY08 206 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 CTPS2Q9NRF8 586 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 CLN6Q9NWW5 311 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 TRPM5Q9NZQ8 1165 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 FAM172BPA6NC97 362 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 ENPP3O14638 875 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 RNF144AP50876 292 aaPredicted RBP12.73□□□□□ -0.37
USP38-201ENST00000307017 GTF2A2P52657 109 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 DCTN2Q13561 401 aaKnown RBP12.73□□□□□ -0.37
USP38-201ENST00000307017 NAPRTQ6XQN6 538 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 EPB41L4BQ9H329 900 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 IL17RBQ9NRM6 502 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 TIMM22Q9Y584 194 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 PCDHA3Q9Y5H8 950 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 DISP1Q96F81 1524 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 TTC24A2A3L6 582 aaPredicted RBP12.73□□□□□ -0.37
USP38-201ENST00000307017 CAPN8A6NHC0 703 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 CCNDBP1O95273 360 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 SLC12A3P55017 1021 aa12.73□□□□□ -0.37
USP38-201ENST00000307017 TMPRSS9Q7Z410 1059 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms