RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 SDR42E2A6NKP2 422 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 KCNK1O00180 336 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 MAFKO60675 156 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 XYLBO75191 536 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 CLDN11O75508 207 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 PTPN2P17706 415 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 OR1E1P30953 314 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 RENBPP51606 427 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 CDH4P55283 916 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 OCRLQ01968 901 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 ZBTB16Q05516 673 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 NIPAL4Q0D2K0 466 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 TBCCQ15814 346 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 CMPK2Q5EBM0 449 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 ARTNQ5T4W7 220 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 DENND1CQ8IV53 801 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 LGI2Q8N0V4 545 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 DEPDC1BQ8WUY9 529 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 CDKL2Q92772 493 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 E2F7Q96AV8 911 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 OXNAD1Q96HP4 312 aaPredicted RBP17.03■□□□□ 0.32
CPSF4-201ENST00000292476 TEKT5Q96M29 485 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 BTBD10Q9BSF8 475 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 BATF3Q9NR55 127 aa17.03■□□□□ 0.32
CPSF4-201ENST00000292476 RAMP2O60895 175 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 PEX11AO75192 247 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 SNNO75324 88 aaPredicted RBP17.02■□□□□ 0.32
CPSF4-201ENST00000292476 POU2F2P09086 479 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 PGAM1P18669 254 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 PAPOLAP51003 745 aaKnown RBP17.02■□□□□ 0.32
CPSF4-201ENST00000292476 SLC7A9P82251 487 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 FRG1Q14331 258 aaKnown RBP17.02■□□□□ 0.32
CPSF4-201ENST00000292476 POLD3Q15054 466 aaPredicted RBP17.02■□□□□ 0.32
CPSF4-201ENST00000292476 ACCSLQ4AC99 568 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 SYCP2LQ5T4T6 812 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 NADSYN1Q6IA69 706 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 CDHR3Q6ZTQ4 885 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 CHST9Q7L1S5 443 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 ADGRD2Q7Z7M1 963 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 TMC8Q8IU68 726 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 MAB21L3Q8N8X9 362 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 LRRN4Q8WUT4 740 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 IGSF8Q969P0 613 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 LRRC3Q9BY71 257 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 WWP1Q9H0M0 922 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 GBA3Q9H227 469 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 ATXN3LQ9H3M9 355 aa17.02■□□□□ 0.32
CPSF4-201ENST00000292476 IPO11Q9UI26 975 aaKnown RBP17.02■□□□□ 0.32
CPSF4-201ENST00000292476 AAR2Q9Y312 384 aaKnown RBP17.02■□□□□ 0.32
CPSF4-201ENST00000292476 BPGMP07738 259 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 SERPINB3P29508 390 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 ETFBP38117 255 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 HNRNPDQ14103 355 aaKnown RBP17.01■□□□□ 0.31
CPSF4-201ENST00000292476 ARHGAP15Q53QZ3 475 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 ALFQ53S48 1182 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 RBM23Q86U06 439 aaKnown RBP17.01■□□□□ 0.31
CPSF4-201ENST00000292476 NUDCD3Q8IVD9 361 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 TP53INP2Q8IXH6 220 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 ARHGAP24Q8N264 748 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 CORO1BQ9BR76 489 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 MAGEH1Q9H213 219 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 STN1Q9H668 368 aaKnown RBP17.01■□□□□ 0.31
CPSF4-201ENST00000292476 ZDHHC7Q9NXF8 308 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 AGO1Q9UL18 857 aaKnown RBP17.01■□□□□ 0.31
CPSF4-201ENST00000292476 XIRP2A4UGR9 3374 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 HMX2A2RU54 273 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 GLRA3O75311 464 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 ANXA9O76027 345 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 JCHAINP01591 159 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 MYL2P10916 166 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 GNAZP19086 355 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 EPHA5P54756 1037 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 TMPRSS15P98073 1019 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 BST1Q10588 318 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 TRMT10BQ6PF06 316 aaKnown RBP17.01■□□□□ 0.31
CPSF4-201ENST00000292476 EP400NLQ6ZTU2 488 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 GAREM2Q75VX8 874 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 TFAP2DQ7Z6R9 452 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 SETD3Q86TU7 594 aaPredicted RBP17.01■□□□□ 0.31
CPSF4-201ENST00000292476 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.01■□□□□ 0.31
CPSF4-201ENST00000292476 NDUFAF2Q8N183 169 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 MPP5Q8N3R9 675 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 ARL14EPQ8N8R7 260 aaPredicted RBP17.01■□□□□ 0.31
CPSF4-201ENST00000292476 ARMC2Q8NEN0 867 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 N4BP2L2Q92802 583 aaPredicted RBP17.01■□□□□ 0.31
CPSF4-201ENST00000292476 IL12RB2Q99665 862 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 IGFLR1Q9H665 355 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 SP110Q9HB58 689 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 MAN1C1Q9NR34 630 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 GKN1Q9NS71 199 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 ARL8BQ9NVJ2 186 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 SORCS3Q9UPU3 1222 aa17.01■□□□□ 0.31
CPSF4-201ENST00000292476 SPTBN5Q9NRC6 3674 aaKnown RBP17■□□□□ 0.31
CPSF4-201ENST00000292476 BRWD1Q9NSI6 2320 aa17■□□□□ 0.31
CPSF4-201ENST00000292476 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17■□□□□ 0.31
CPSF4-201ENST00000292476 A0A1B0GVM2 712 aa17■□□□□ 0.31
CPSF4-201ENST00000292476 TCAF2A6NFQ2 919 aa17■□□□□ 0.31
CPSF4-201ENST00000292476 ZBTB24O43167 697 aaPredicted RBP17■□□□□ 0.31
CPSF4-201ENST00000292476 CLASP2O75122 1294 aaKnown RBP17■□□□□ 0.31
CPSF4-201ENST00000292476 CNTN5O94779 1100 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms