RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 EMC2Q15006 297 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 ZNHIT3Q15649 155 aaPredicted RBP8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 C10orf62Q5T681 223 aaPredicted RBP8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 C1orf189Q5VU69 101 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 RSBN1Q5VWQ0 802 aaPredicted RBP8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 ACOT12Q8WYK0 555 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 PAIP1Q9H074 479 aaKnown RBP8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 ZNF624Q9P2J8 865 aaPredicted RBP8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 ZNF451Q9Y4E5 1061 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 TCF4P15884 667 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 LBPP18428 481 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 CD151P48509 253 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 OTUD4Q01804 1114 aaKnown RBP8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 NME3Q13232 169 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 HSDL1Q3SXM5 330 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 ZC2HC1CQ53FD0 456 aaPredicted RBP8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 SEMA6BQ9H3T3 888 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 DDX18Q9NVP1 670 aaKnown RBP8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 DAPK2Q9UIK4 370 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 PSME2Q9UL46 239 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 IFT52Q9Y366 437 aa8.47□□□□□ -1.05
CACNA1D-201ENST00000288139 RRN3P2A6NIE6 340 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 ZBTB39O15060 712 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 SEC24AO95486 1093 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 ALDH7A1P49419 539 aaKnown RBP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 PLD1Q13393 1074 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 NR1D2Q14995 579 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 TYW3Q6IPR3 259 aaKnown RBP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 FAM71DQ8N9W8 422 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 USP7Q93009 1102 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 TCEAL3Q969E4 200 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 RBM4BQ9BQ04 359 aaKnown RBP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 RBM4Q9BWF3 364 aaKnown RBP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 NUAK2Q9H093 628 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 TSR3Q9UJK0 312 aaKnown RBP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 UBR1Q8IWV7 1749 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 CDH18Q13634 790 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 ZSWIM7Q19AV6 140 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 MPP5Q8N3R9 675 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 FAM84BQ96KN1 310 aaPredicted RBP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 ISPDA4D126 451 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 SEC24DO94855 1032 aaPredicted RBP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 CRHR1P34998 444 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 MPP1Q00013 466 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 SCN1BQ07699 218 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 SGCGQ13326 291 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 DGKDQ16760 1214 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 AKIRIN2Q53H80 203 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 PPP1R15BQ5SWA1 713 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 ERICH5Q6P6B1 374 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 TMEM132CQ8N3T6 1108 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 LRRC57Q8N9N7 239 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 SUN3Q8TAQ9 357 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 CNOT11Q9UKZ1 510 aaKnown RBP8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 INVSQ9Y283 1065 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 ARL5AQ9Y689 179 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 TJP1Q07157 1748 aa8.46□□□□□ -1.05
CACNA1D-201ENST00000288139 A0A0A0MRY4 1105 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 TPD52L2O43399 206 aaKnown RBP8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 RLN1P04808 185 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 SLC7A2P52569 658 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 FOXM1Q08050 763 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 SNAP47Q5SQN1 464 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 IL31Q6EBC2 164 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 DAW1Q8N136 415 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 CSGALNACT1Q8TDX6 532 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 SERAC1Q96JX3 654 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 SPATA13Q96N96 652 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 TTYH3Q9C0H2 523 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 STXBP5LQ9Y2K9 1186 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 AP1M2Q9Y6Q5 423 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 CLRN2A0PK11 232 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 BCLAF3A2AJT9 711 aaKnown RBP8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 MED24O75448 989 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 PRKAR2AP13861 404 aaKnown RBP8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 MYBPC3Q14896 1274 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 CASP12Q6UXS9 341 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 OR5T3Q8NGG3 340 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 TSPEARQ8WU66 669 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 MXRA8Q9BRK3 442 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 POLR1BQ9H9Y6 1135 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 PDGFCQ9NRA1 345 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 FBXO10Q9UK96 956 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 DNAJC16Q9Y2G8 782 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 TDRKHQ9Y2W6 561 aaKnown RBP8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 GSC2O15499 205 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 AP5Z1O43299 807 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 SNCGO76070 127 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 MNDAP41218 407 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 FKBP1AP62942 108 aaKnown RBP8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 CARD16Q5EG05 197 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 BHLHB9Q6PI77 547 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 SLC7A14Q8TBB6 771 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 NINJ2Q9NZG7 142 aa8.46□□□□□ -1.06
CACNA1D-201ENST00000288139 PRKAG3Q9UGI9 489 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms