RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 SYT16Q17RD7 645 aa9.6□□□□□ -0.87
PDCD4-201ENST00000280154 UAP1L1Q3KQV9 507 aa9.6□□□□□ -0.87
PDCD4-201ENST00000280154 ATF7IP2Q5U623 682 aa9.6□□□□□ -0.87
PDCD4-201ENST00000280154 NOTUMQ6P988 496 aa9.6□□□□□ -0.87
PDCD4-201ENST00000280154 TIPARPQ7Z3E1 657 aaKnown RBP9.6□□□□□ -0.87
PDCD4-201ENST00000280154 WDR49Q8IV35 697 aa9.6□□□□□ -0.87
PDCD4-201ENST00000280154 GPD1LQ8N335 351 aa9.6□□□□□ -0.87
PDCD4-201ENST00000280154 CITED1Q99966 193 aa9.6□□□□□ -0.87
PDCD4-201ENST00000280154 K7ERI5 159 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 AXIN1O15169 862 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 NFICP08651 508 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 QDPRP09417 244 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 RNF224P0DH78 156 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 TAP2Q03519 686 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 DSC1Q08554 894 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 TRIM60Q495X7 471 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 CNKSR3Q6P9H4 555 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 REXO1L1PQ8IX06 675 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 XXYLT1Q8NBI6 393 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 ZBTB34Q8NCN2 500 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 AKR7LQ8NHP1 331 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 STK33Q9BYT3 514 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 TINAGL1Q9GZM7 467 aaPredicted RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 TBC1D23Q9NUY8 699 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 APPL1Q9UKG1 709 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 GIT1Q9Y2X7 761 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 DENND4AQ7Z401 1863 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 MAGEA13PA6NCF6 341 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 DNALI1O14645 258 aaPredicted RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 SMAD7O15105 426 aaKnown RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 GCNT3O95395 438 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 VTNP04004 478 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 SNRNP70P08621 437 aaKnown RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 NR2C1P13056 603 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 CPB1P15086 417 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 RPS26P62854 115 aaKnown RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 FLOT2Q14254 428 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 ARL13BQ3SXY8 428 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 INTS11Q5TA45 600 aaKnown RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 CD300LGQ6UXG3 332 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 GPR155Q7Z3F1 870 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 METTL23Q86XA0 190 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 RHPN2Q8IUC4 686 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 SMYD4Q8IYR2 804 aaPredicted RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 TEX47Q8TBZ9 253 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 METTL2AQ96IZ6 378 aaKnown RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 CCDC43Q96MW1 224 aaKnown RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 CGRRF1Q99675 332 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 TRIM56Q9BRZ2 755 aaKnown RBP9.59□□□□□ -0.87
PDCD4-201ENST00000280154 SYT11Q9BT88 431 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 RNF38Q9H0F5 515 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 CERS4Q9HA82 394 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 CTNND2Q9UQB3 1225 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 POLHQ9Y253 713 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 PCNTO95613 3336 aa9.59□□□□□ -0.87
PDCD4-201ENST00000280154 A6NHS1 94 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 ULK1O75385 1050 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 SMNDC1O75940 238 aaKnown RBP eCLIP9.58□□□□□ -0.88
PDCD4-201ENST00000280154 TFRCP02786 760 aaKnown RBP9.58□□□□□ -0.88
PDCD4-201ENST00000280154 POU2F2P09086 479 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 ITGB8P26012 769 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 JAM2P57087 298 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 ARHGAP8P85298 464 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 SP4Q02446 784 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 CTC1Q2NKJ3 1217 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 CDONQ4KMG0 1287 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 TMEM108Q6UXF1 575 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 TRAPPC11Q7Z392 1133 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 NDST4Q9H3R1 872 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 VCX3AQ9NNX9 186 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 INTS9Q9NV88 658 aaKnown RBP9.58□□□□□ -0.88
PDCD4-201ENST00000280154 COX16Q9P0S2 106 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 TBC1D14Q9P2M4 693 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 VPS51Q9UID3 782 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 FHOD1Q9Y613 1164 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 GMEB1Q9Y692 573 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 A0A0U1RQK1 487 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 ZNF320A2RRD8 509 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 FGF4P08620 206 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 AHCYP23526 432 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 RYKP34925 604 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 EIF2B2P49770 351 aaKnown RBP9.58□□□□□ -0.88
PDCD4-201ENST00000280154 METAP1P53582 386 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 MLLT6P55198 1093 aaPredicted RBP9.58□□□□□ -0.88
PDCD4-201ENST00000280154 WNT7BP56706 349 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 RHAGQ02094 409 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 CACNB1Q02641 598 aaPredicted RBP9.58□□□□□ -0.88
PDCD4-201ENST00000280154 SQLEQ14534 574 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 MAN2A1Q16706 1144 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 FAM156AQ8NDB6 213 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 SPATA4Q8NEY3 305 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 HLA-CQ95604 372 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 RRNAD1Q96FB5 475 aaKnown RBP9.58□□□□□ -0.88
PDCD4-201ENST00000280154 CBWD1Q9BRT8 395 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 FAM192AQ9GZU8 254 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 TREM1Q9NP99 234 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 UBP1Q9NZI7 540 aa9.58□□□□□ -0.88
PDCD4-201ENST00000280154 ATXN7L1Q9ULK2 861 aaPredicted RBP9.58□□□□□ -0.88
PDCD4-201ENST00000280154 CORO1CQ9ULV4 474 aaPredicted RBP9.58□□□□□ -0.88
PDCD4-201ENST00000280154 AURKCQ9UQB9 309 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms