RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 SERPINF2P08697 491 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 MZF1P28698 734 aaPredicted RBP22.32■■□□□ 1.16
CCDC7-201ENST00000277657 FOXN2P32314 431 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 ARCN1P48444 511 aaKnown RBP22.32■■□□□ 1.16
CCDC7-201ENST00000277657 SMAD1Q15797 465 aaKnown RBP22.32■■□□□ 1.16
CCDC7-201ENST00000277657 SIRPB2Q5JXA9 342 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 GPR158Q5T848 1215 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 TDRD5Q8NAT2 981 aaKnown RBP22.32■■□□□ 1.16
CCDC7-201ENST00000277657 WFDC5Q8TCV5 224 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 ALG14Q96F25 216 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 TGS1Q96RS0 853 aaKnown RBP22.32■■□□□ 1.16
CCDC7-201ENST00000277657 SLC17A7Q9P2U7 560 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 HEATR9A2RTY3 570 aa22.31■■□□□ 1.16
CCDC7-201ENST00000277657 SOBPA7XYQ1 873 aa22.31■■□□□ 1.16
CCDC7-201ENST00000277657 VIMP08670 466 aaKnown RBP22.31■■□□□ 1.16
CCDC7-201ENST00000277657 ETV4P43268 484 aa22.31■■□□□ 1.16
CCDC7-201ENST00000277657 HHATQ5VTY9 493 aa22.31■■□□□ 1.16
CCDC7-201ENST00000277657 ESRP1Q6NXG1 681 aaKnown RBP22.31■■□□□ 1.16
CCDC7-201ENST00000277657 RGS9BPQ6ZS82 235 aa22.31■■□□□ 1.16
CCDC7-201ENST00000277657 CMTM8Q8IZV2 173 aa22.31■■□□□ 1.16
CCDC7-201ENST00000277657 LEMD2Q8NC56 503 aa22.31■■□□□ 1.16
CCDC7-201ENST00000277657 ACMSDQ8TDX5 336 aa22.31■■□□□ 1.16
CCDC7-201ENST00000277657 RBBP8Q99708 897 aa22.31■■□□□ 1.16
CCDC7-201ENST00000277657 PAIP2Q9BPZ3 127 aaKnown RBP22.31■■□□□ 1.16
CCDC7-201ENST00000277657 E2F8A0AVK6 867 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 COPEO14579 308 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 ALDOAP04075 364 aaKnown RBP22.3■■□□□ 1.16
CCDC7-201ENST00000277657 DHRS4L1P0CG22 281 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 TAC1P20366 129 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 CES1P23141 567 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 ARNTP27540 789 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 RGRP47804 291 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 ERVK-21P61565 698 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 CDK18Q07002 472 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 CDH18Q13634 790 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 TEAD2Q15562 447 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 PDK4Q16654 411 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 MPPE1Q53F39 396 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 STRA8Q7Z7C7 330 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 CNTN4Q8IWV2 1026 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 TTC16Q8NEE8 873 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 SRPK1Q96SB4 655 aaKnown RBP22.3■■□□□ 1.16
CCDC7-201ENST00000277657 SMG9Q9H0W8 520 aaKnown RBP22.3■■□□□ 1.16
CCDC7-201ENST00000277657 TASP1Q9H6P5 420 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 NOD2Q9HC29 1040 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 IARS2Q9NSE4 1012 aaKnown RBP22.3■■□□□ 1.16
CCDC7-201ENST00000277657 NSMCE4AQ9NXX6 385 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 CCDC78A2IDD5 438 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 SNAP91O60641 907 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 XYLBO75191 536 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 POU2F2P09086 479 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 HLA-DPA1P20036 260 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 LIMK2P53671 638 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 CSE1LP55060 971 aaKnown RBP22.3■■□□□ 1.16
CCDC7-201ENST00000277657 SLC5A9Q2M3M2 681 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 INO80DQ53TQ3 878 aaPredicted RBP22.3■■□□□ 1.16
CCDC7-201ENST00000277657 KIAA0930Q6ICG6 404 aaPredicted RBP22.3■■□□□ 1.16
CCDC7-201ENST00000277657 CDHR3Q6ZTQ4 885 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 MFN1Q8IWA4 741 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 SH3RF2Q8TEC5 729 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 DDI1Q8WTU0 396 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 ISL2Q96A47 359 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 TRIB3Q96RU7 358 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 C12orf65Q9H3J6 166 aaKnown RBP22.3■■□□□ 1.16
CCDC7-201ENST00000277657 SLC2A6Q9UGQ3 507 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 CCL26Q9Y258 94 aa22.3■■□□□ 1.16
CCDC7-201ENST00000277657 INSIG1O15503 277 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 PAPSS2O95340 614 aaPredicted RBP22.29■■□□□ 1.16
CCDC7-201ENST00000277657 FGF1P05230 155 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 SPRP35270 261 aaPredicted RBP22.29■■□□□ 1.16
CCDC7-201ENST00000277657 AVPR1AP37288 418 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 CSKP41240 450 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 SEPT7Q16181 437 aaKnown RBP22.29■■□□□ 1.16
CCDC7-201ENST00000277657 CNGA3Q16281 694 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 ARHGAP15Q53QZ3 475 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 PRSS36Q5K4E3 855 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 DCAF4L2Q8NA75 395 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 IFT43Q96FT9 208 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 NSMCE3Q96MG7 304 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 VPS11Q9H270 941 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 ZDHHC7Q9NXF8 308 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 VPS28Q9UK41 221 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 BPTFQ12830 3046 aa22.29■■□□□ 1.16
CCDC7-201ENST00000277657 MROH6A6NGR9 719 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 SIN3BO75182 1162 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 VAPBO95292 243 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 ALADP13716 330 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 PAMP19021 973 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 CRHR1P34998 444 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 HNRNPH2P55795 449 aaKnown RBP22.28■■□□□ 1.16
CCDC7-201ENST00000277657 GPM6BQ13491 265 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 SEPT6Q14141 434 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 SHHQ15465 462 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 COL13A1Q5TAT6 717 aaPredicted RBP22.28■■□□□ 1.16
CCDC7-201ENST00000277657 FYB2Q5VWT5 728 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 PIGWQ7Z7B1 504 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 NDUFAF2Q8N183 169 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 NUDCD1Q96RS6 583 aa22.28■■□□□ 1.16
CCDC7-201ENST00000277657 NSRP1Q9H0G5 558 aaKnown RBP22.28■■□□□ 1.16
CCDC7-201ENST00000277657 VPS51Q9UID3 782 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms