RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 GPRC5CQ9NQ84 441 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 CHST7Q9NS84 486 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 SAMD4AQ9UPU9 718 aaKnown RBP8.78□□□□□ -1
SCUBE3-201ENST00000274938 PCDHB5Q9Y5E4 795 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 MTA2O94776 668 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 GRIA4P48058 902 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 POLR2LP62875 67 aaKnown RBP8.78□□□□□ -1
SCUBE3-201ENST00000274938 GALNT3Q14435 633 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 LCN1P1Q5VSP4 162 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 LIPMQ5VYY2 423 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 TRIM40Q6P9F5 258 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 CERS2Q96G23 380 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 ACSS3Q9H6R3 686 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.78□□□□□ -1
SCUBE3-201ENST00000274938 METTL21EPA6NDL7 271 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 MICAL2O94851 1124 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 OTCP00480 354 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 LYNP07948 512 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 FGFR1P11362 822 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 MAPK8P45983 427 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 ARF5P84085 180 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 SCN1BQ07699 218 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 KCNA10Q16322 511 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 SEZ6Q53EL9 994 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 ARMC12Q5T9G4 340 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 AFTPHQ6ULP2 937 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 THAP5Q7Z6K1 395 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 DSG4Q86SJ6 1040 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 PIK3R3Q92569 461 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 SKA1Q96BD8 255 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 ZNF607Q96SK3 696 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 CDH19Q9H159 772 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 S100A14Q9HCY8 104 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 SLC12A4Q9UP95 1085 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 CASKO14936 926 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 EDF1O60869 148 aaKnown RBP8.78□□□□□ -1
SCUBE3-201ENST00000274938 UPP2O95045 317 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 RTN3O95197 1032 aaPredicted RBP8.78□□□□□ -1
SCUBE3-201ENST00000274938 CYP1A2P05177 515 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 CETPP11597 493 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 RBL1P28749 1068 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 CDC25CP30307 473 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 MMP13P45452 471 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 NAGLUP54802 743 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 SPIBQ01892 262 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 LIN52Q52LA3 116 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 LACTB2Q53H82 288 aaPredicted RBP8.78□□□□□ -1
SCUBE3-201ENST00000274938 FNBP1LQ5T0N5 605 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 OAFQ86UD1 273 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 RFT1Q96AA3 541 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 ATG4CQ96DT6 458 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 DHX33Q9H6R0 707 aaKnown RBP8.78□□□□□ -1
SCUBE3-201ENST00000274938 MCUBQ9NWR8 336 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 ZNF224Q9NZL3 707 aa8.78□□□□□ -1
SCUBE3-201ENST00000274938 AP3D1O14617 1153 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 ULK1O75385 1050 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 REM1O75628 298 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 MIPP30301 263 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 CLK3P49761 638 aaKnown RBP8.77□□□□□ -1
SCUBE3-201ENST00000274938 ARFIP1P53367 373 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 BCL2L1Q07817 233 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 RIPPLY1Q0D2K3 151 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 C16orf46Q6P387 395 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 ZPBP2Q6X784 338 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 TMPRSS11AQ6ZMR5 421 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 GPR180Q86V85 440 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 PNPT1Q8TCS8 783 aaKnown RBP8.77□□□□□ -1
SCUBE3-201ENST00000274938 HELQQ8TDG4 1101 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 C17orf50Q8WW18 174 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 YME1L1Q96TA2 773 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 TRNAU1APQ9NX07 287 aaKnown RBP8.77□□□□□ -1
SCUBE3-201ENST00000274938 CARD8Q9Y2G2 431 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 DISP1Q96F81 1524 aa8.77□□□□□ -1
SCUBE3-201ENST00000274938 PNPLA6Q8IY17 1366 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 GAKO14976 1311 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 SPATA31A3Q5VYP0 1347 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 SUV39H1O43463 412 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 LIASO43766 372 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 OR10H3O60404 316 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 ERBB2P04626 1255 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 URODP06132 367 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 PSMD5Q16401 504 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 LSM12Q3MHD2 195 aaKnown RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 TMEM119Q4V9L6 283 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 ERICH5Q6P6B1 374 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 GPRIN3Q6ZVF9 776 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 PTCHD4Q6ZW05 846 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 GMCL1P1Q8NEA9 526 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 PIH1D2Q8WWB5 315 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 RCN3Q96D15 328 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 A0A0B4J269 797 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 PRMT5O14744 637 aaPredicted RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 HOXC6P09630 235 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 PCSK2P16519 638 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 YBX3P16989 372 aaKnown RBP eCLIP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 NFKB1P19838 968 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 OR1E1P30953 314 aa8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 EIF2S3P41091 472 aaKnown RBP8.77□□□□□ -1.01
SCUBE3-201ENST00000274938 CBX5P45973 191 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms