RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 PGRP06401 933 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 SERPINF2P08697 491 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 CDH1P12830 882 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 MLNP12872 115 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 TCF3P15923 654 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 DNAJB1P25685 340 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 CD40LGP29965 261 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 SMIM11AP58511 58 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 DLG1Q12959 904 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 PHKG1Q16816 387 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 ATPAF2Q8N5M1 289 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 CAMKK1Q8N5S9 505 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 TNIP3Q96KP6 325 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 COQ10BQ9H8M1 238 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 SH3BP4Q9P0V3 963 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 SPEF2Q9C093 1822 aa8.4□□□□□ -1.06
SNCAIP-201ENST00000261367 OR14I1A6ND48 311 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 ABCB7O75027 752 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 ERBB2P04626 1255 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 MTMR1Q13613 665 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 NDUFAF6Q330K2 333 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 BHLHB9Q6PI77 547 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 DNAJB7Q7Z6W7 309 aaPredicted RBP8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 PCDH20Q8N6Y1 951 aaKnown RBP8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 ZSWIM2Q8NEG5 633 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 OR56A4Q8NGH8 313 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 ZC3H10Q96K80 434 aaKnown RBP8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 FAM84AQ96KN4 292 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 PANX3Q96QZ0 392 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 TCEAL7Q9BRU2 100 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 CATSPERBQ9H7T0 1116 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 CCDC167Q9P0B6 97 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 K7EPI3 171 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 ITGA10O75578 1167 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 HIST1H2AGP0C0S8 130 aaPredicted RBP8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 HIST1H2ADP20671 130 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 PTPN7P35236 360 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC15A1P46059 708 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 GSTM5P46439 218 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 PIK3CGP48736 1102 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 GABARAPL2P60520 117 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 FOXM1Q08050 763 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 BNIP3Q12983 259 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 SCARF1Q14162 830 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 SEC23AQ15436 765 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 TGFBIQ15582 683 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 GPR162Q16538 588 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 OGFRL1Q5TC84 451 aaPredicted RBP8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 ZNF549Q6P9A3 640 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 PLEKHG7Q6ZR37 379 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 LINC00299Q6ZSB3 139 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 SLITRK4Q8IW52 837 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 CBR4Q8N4T8 237 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 DNAJB8Q8NHS0 232 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 HIST1H2AHQ96KK5 128 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 KCTD15Q96SI1 283 aaPredicted RBP8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 HIST1H2AJQ99878 128 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 H2AFJQ9BTM1 129 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 CCDC32Q9BV29 185 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 RANBP3Q9H6Z4 567 aaPredicted RBP8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 LRRC4CQ9HCJ2 640 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 TOPORSQ9NS56 1045 aaPredicted RBP8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 CATSPERZQ9NTU4 200 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 TRPM5Q9NZQ8 1165 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 RNF112Q9ULX5 631 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 MAB21L2Q9Y586 359 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 MYH7P12883 1935 aa8.4□□□□□ -1.07
SNCAIP-201ENST00000261367 MYPNQ86TC9 1320 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 A0A0B4J269 797 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 INO80B-WBP1J3KQ70 363 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 BCKDKO14874 412 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 PLD2O14939 933 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 PRMT3O60678 531 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 MRPS14O60783 128 aaKnown RBP8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 ZNF682O95780 498 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 CST1P01037 141 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 GH1P01241 217 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 CD4P01730 458 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 BMT2Q1RMZ1 405 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 XRRA1Q6P2D8 792 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 BBS12Q6ZW61 710 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC9A9Q8IVB4 645 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 FAM126BQ8IXS8 530 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 CCDC185Q8N715 623 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 SIMC1Q8NDZ2 872 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 LNX1Q8TBB1 728 aaPredicted RBP8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC20A1Q8WUM9 679 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 CIB1Q99828 191 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 MRPL9Q9BYD2 267 aaKnown RBP8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 INO80BQ9C086 356 aaPredicted RBP8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 SP110Q9HB58 689 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 FEM1BQ9UK73 627 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 VANGL2Q9ULK5 521 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 USP18Q9UMW8 372 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 KCNH4Q9UQ05 1017 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 ECM29Q5VYK3 1845 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 UBXN8O00124 270 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 TNFRSF10AO00220 468 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 NOL4O94818 638 aa8.39□□□□□ -1.07
SNCAIP-201ENST00000261367 GUCA1CO95843 209 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms