RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SLC17A7Q9P2U7 560 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 SLC2A6Q9UGQ3 507 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 VPS28Q9UK41 221 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 YBX2Q9Y2T7 364 aaKnown RBP22.62■■□□□ 1.21
SIX3-201ENST00000260653 ZWINTO95229 277 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 PFKLP17858 780 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 HOXA9P31269 272 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 CSKP41240 450 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 MAGEA10P43363 369 aaPredicted RBP22.62■■□□□ 1.21
SIX3-201ENST00000260653 SERPINH1P50454 418 aaKnown RBP22.62■■□□□ 1.21
SIX3-201ENST00000260653 GPM6BQ13491 265 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 SIRPB2Q5JXA9 342 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 ESRP1Q6NXG1 681 aaKnown RBP22.62■■□□□ 1.21
SIX3-201ENST00000260653 ZNF783Q6ZMS7 281 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 MFN1Q8IWA4 741 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 TXNDC16Q9P2K2 825 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 ZNF510Q9Y2H8 683 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 HCFC2Q9Y5Z7 792 aa22.62■■□□□ 1.21
SIX3-201ENST00000260653 CD160O95971 181 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 ATXN1LP0C7T5 689 aaKnown RBP22.61■■□□□ 1.21
SIX3-201ENST00000260653 DRD4P21917 467 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 CYTH1Q15438 398 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 LVRNQ6Q4G3 990 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 CPXM2Q8N436 756 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 NSMCE3Q96MG7 304 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 CPNE1Q99829 537 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 NOD2Q9HC29 1040 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 OR51B4Q9Y5P0 310 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 PRRC2BQ5JSZ5 2229 aaKnown RBP22.61■■□□□ 1.21
SIX3-201ENST00000260653 LOC285095A0A1B0GVY8 99 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 ZMPSTE24O75844 475 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 VIMP08670 466 aaKnown RBP22.61■■□□□ 1.21
SIX3-201ENST00000260653 ADRA1DP25100 572 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 CNTFP26441 200 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 GP5P40197 560 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 PBX2P40425 430 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 IL9RQ01113 521 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 MSLNQ13421 630 aaPredicted RBP22.61■■□□□ 1.21
SIX3-201ENST00000260653 RFTN1Q14699 578 aaPredicted RBP22.61■■□□□ 1.21
SIX3-201ENST00000260653 ADGRD2Q7Z7M1 963 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 PTCD2Q8WV60 388 aaKnown RBP22.61■■□□□ 1.21
SIX3-201ENST00000260653 IARS2Q9NSE4 1012 aaKnown RBP22.61■■□□□ 1.21
SIX3-201ENST00000260653 CLEC4EQ9ULY5 219 aa22.61■■□□□ 1.21
SIX3-201ENST00000260653 MYOFQ9NZM1 2061 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 TCP11X1B4DZS4 312 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 FGF19O95750 216 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 ITGA2BP08514 1039 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 SERPINF2P08697 491 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 NEK3P51956 506 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 STRA8Q7Z7C7 330 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 MRM3Q9HC36 420 aaKnown RBP22.6■■□□□ 1.21
SIX3-201ENST00000260653 PRKAG3Q9UGI9 489 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 HNRNPA1P09651 372 aaKnown RBP eCLIP22.6■■□□□ 1.21
SIX3-201ENST00000260653 ARNTP27540 789 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 FOXN2P32314 431 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 SCNN1BP51168 640 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 ERVK-21P61565 698 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 CNGA3Q16281 694 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 CDHR3Q6ZTQ4 885 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 GRASPQ7Z6J2 395 aaPredicted RBP22.6■■□□□ 1.21
SIX3-201ENST00000260653 CPLX4Q7Z7G2 160 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 ALG14Q96F25 216 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 IFT43Q96FT9 208 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 ATXN7L3BQ96GX2 97 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 TASP1Q9H6P5 420 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 TREX1Q9NSU2 369 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 PCMTD2Q9NV79 361 aa22.6■■□□□ 1.21
SIX3-201ENST00000260653 XYLBO75191 536 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 VAPBO95292 243 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 ALDOAP04075 364 aaKnown RBP22.59■■□□□ 1.21
SIX3-201ENST00000260653 CR2P20023 1033 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 CCNFP41002 786 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 ABCG1P45844 678 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 CDK18Q07002 472 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 HHATQ5VTY9 493 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 PDPK2PQ6A1A2 396 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 MICALCLQ6ZW33 695 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 USP13Q92995 863 aaPredicted RBP22.59■■□□□ 1.21
SIX3-201ENST00000260653 FEM1CQ96JP0 617 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 MAGEB18Q96M61 343 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 HAUS2Q9NVX0 235 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 VPS51Q9UID3 782 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 COPEO14579 308 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 TM9SF1O15321 606 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 TMCC1O94876 653 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 PRAMEF12O95522 483 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 DDX6P26196 483 aaKnown RBP eCLIP22.59■■□□□ 1.21
SIX3-201ENST00000260653 GALNT3Q14435 633 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 MPPE1Q53F39 396 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 ARHGAP15Q53QZ3 475 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 TIFABQ6ZNK6 161 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 SRPK1Q96SB4 655 aaKnown RBP22.59■■□□□ 1.21
SIX3-201ENST00000260653 RBBP8Q99708 897 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 SLC13A1Q9BZW2 595 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 ATG2AQ2TAZ0 1938 aa22.59■■□□□ 1.21
SIX3-201ENST00000260653 HEATR9A2RTY3 570 aa22.58■■□□□ 1.21
SIX3-201ENST00000260653 ARCN1P48444 511 aaKnown RBP22.58■■□□□ 1.21
SIX3-201ENST00000260653 PRSS36Q5K4E3 855 aa22.58■■□□□ 1.21
SIX3-201ENST00000260653 GRTP1Q5TC63 336 aa22.58■■□□□ 1.21
SIX3-201ENST00000260653 APCDD1Q8J025 514 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms