RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 MAPK12P53778 367 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 NCKAP1LP55160 1127 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ERVK-24P63145 666 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 GNA12Q03113 381 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 C17orf67Q0P5P2 114 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 BAMBIQ13145 260 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 DSG2Q14126 1118 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CARTPTQ16568 116 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 SLC9C1Q4G0N8 1177 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF772Q68DY9 489 aaPredicted RBP7.82□□□□□ -1.16
GPNMB-201ENST00000258733 BHLHB9Q6PI77 547 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ISLR2Q6UXK2 745 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 HEATR3Q7Z4Q2 680 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 GALNTL5Q7Z4T8 443 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 RABEPKQ7Z6M1 372 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 SIRT2Q8IXJ6 389 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CEP76Q8TAP6 659 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 SLC10A4Q96EP9 437 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CSPG4P5Q96PW8 444 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ACTR6Q9GZN1 396 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 POLR1EQ9GZS1 481 aaKnown RBP7.82□□□□□ -1.16
GPNMB-201ENST00000258733 Q9H521 79 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 TJP2Q9UDY2 1190 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 EBF1Q9UH73 591 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF221Q9UK13 617 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CDV3Q9UKY7 258 aaKnown RBP7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ZFR2Q9UPR6 939 aaKnown RBP7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CHKBQ9Y259 395 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 MAST3O60307 1309 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 RGSL1A5PLK6 1076 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CENPXA8MT69 81 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 SGCEO43556 437 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 HS6ST1O60243 411 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 APOL3O95236 402 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 RAB3DO95716 219 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 MBP02144 154 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 APOA1P02647 267 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 OPN1MWP04001 364 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 OPN1MW2P0DN77 364 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 OPN1MW3P0DN78 364 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 IFI30P13284 250 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 NFKB1P19838 968 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 BMI1P35226 326 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
GPNMB-201ENST00000258733 PIK3CBP42338 1070 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ARCN1P48444 511 aaKnown RBP7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CREB5Q02930 508 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ART3Q13508 389 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 RRP1BQ14684 758 aaKnown RBP7.82□□□□□ -1.16
GPNMB-201ENST00000258733 SEC23AQ15436 765 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 TIGD6Q17RP2 521 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 YIF1BQ5BJH7 314 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 DPPA2Q7Z7J5 298 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 NEK8Q86SG6 692 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 GRAMD1CQ8IYS0 662 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 FBXO27Q8NI29 283 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 HTR3CQ8WXA8 447 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 C19orf60Q96EN9 201 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 TWNKQ96RR1 684 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 QRSL1Q9H0R6 528 aaKnown RBP7.82□□□□□ -1.16
GPNMB-201ENST00000258733 PNPLA8Q9NP80 782 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CNNM1Q9NRU3 951 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 RBM12Q9NTZ6 932 aaKnown RBP7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ZFP57Q9NU63 452 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 DCDC2Q9UHG0 476 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 AP4E1Q9UPM8 1137 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 BOLA1Q9Y3E2 137 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ADGRF5Q8IZF2 1346 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 A0A1W2PPW3 197 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CCDC85CA6NKD9 419 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 H7C0S8 307 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PDHXO00330 501 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 SLC22A2O15244 555 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CBLP22681 906 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 AMPD1P23109 780 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CNTFP26441 200 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PIK3R1P27986 724 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 TIE1P35590 1138 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 HMGCLP35914 325 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CASP3P42574 277 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 HTR3AP46098 478 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 RAB13P51153 203 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CCR9P51686 369 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 TEKQ02763 1124 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 LRRC63Q05C16 580 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 BNIP3Q12983 259 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF177Q13360 481 aaPredicted RBP7.81□□□□□ -1.16
GPNMB-201ENST00000258733 DNASE1L3Q13609 305 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ODF1Q14990 250 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 NR1I3Q14994 352 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 STXBP2Q15833 593 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 PLEKHG4Q58EX7 1191 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 TMEM81Q6P7N7 255 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 KDELC2Q7Z4H8 507 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 NLRX1Q86UT6 975 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 NIM1KQ8IY84 436 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 CPNE9Q8IYJ1 553 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 ATG16L2Q8NAA4 619 aa7.81□□□□□ -1.16
GPNMB-201ENST00000258733 IL17REQ8NFR9 667 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms