RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 CCDC166P0CW27 439 aa15.89■□□□□ 0.13
RFX1-201ENST00000254325 MPSTP25325 297 aa15.89■□□□□ 0.13
RFX1-201ENST00000254325 PRKAA2P54646 552 aa15.89■□□□□ 0.13
RFX1-201ENST00000254325 SH2D4BQ5SQS7 431 aa15.89■□□□□ 0.13
RFX1-201ENST00000254325 LRRC8EQ6NSJ5 796 aa15.89■□□□□ 0.13
RFX1-201ENST00000254325 CAPNS2Q96L46 248 aa15.89■□□□□ 0.13
RFX1-201ENST00000254325 UPF3AQ9H1J1 476 aaKnown RBP15.89■□□□□ 0.13
RFX1-201ENST00000254325 SLC2A6Q9UGQ3 507 aa15.89■□□□□ 0.13
RFX1-201ENST00000254325 SCML2Q9UQR0 700 aa15.89■□□□□ 0.13
RFX1-201ENST00000254325 TRPC5OSA6NMA1 111 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 HHLA1C9JL84 531 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 RHOBTB1O94844 696 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 THRAP10827 490 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 SLC10A7Q0GE19 358 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 STXBP5Q5T5C0 1151 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 DDX50Q9BQ39 737 aaKnown RBP15.88■□□□□ 0.13
RFX1-201ENST00000254325 TTPALQ9BTX7 342 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 VPS45Q9NRW7 570 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 SIP14410 1827 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 SLCO1B7G3V0H7 640 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 J3KR12 359 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 PSMG1O95456 288 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 MYL4P12829 197 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 SNX30Q5VWJ9 437 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 DDIASQ8IXT1 998 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 CCDC126Q96EE4 140 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 NAF1Q96HR8 494 aaKnown RBP15.88■□□□□ 0.13
RFX1-201ENST00000254325 CLPTM1LQ96KA5 538 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 EXOC2Q96KP1 924 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.88■□□□□ 0.13
RFX1-201ENST00000254325 RAP2CQ9Y3L5 183 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 A0A087X1B8 175 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 TTC24A2A3L6 582 aaPredicted RBP15.88■□□□□ 0.13
RFX1-201ENST00000254325 E5RI56 91 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 SIN3BO75182 1162 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 FGF3P11487 239 aaPredicted RBP15.88■□□□□ 0.13
RFX1-201ENST00000254325 EPHA3P29320 983 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 OR1D2P34982 312 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 TUFMP49411 452 aaKnown RBP15.88■□□□□ 0.13
RFX1-201ENST00000254325 ATXN3P54252 364 aaPredicted RBP15.88■□□□□ 0.13
RFX1-201ENST00000254325 TRIP4Q15650 581 aaPredicted RBP15.88■□□□□ 0.13
RFX1-201ENST00000254325 LDB1Q86U70 411 aaPredicted RBP15.88■□□□□ 0.13
RFX1-201ENST00000254325 TSGA13Q96PP4 275 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 WDR55Q9H6Y2 383 aaPredicted RBP15.88■□□□□ 0.13
RFX1-201ENST00000254325 DNMT3LQ9UJW3 386 aa15.88■□□□□ 0.13
RFX1-201ENST00000254325 H0Y626 953 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 HDAC3O15379 428 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 CNTN5O94779 1100 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 T-ENOLP0DO92 83 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 GATMP50440 423 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 ZNF33AQ06730 810 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 LBRQ14739 615 aaKnown RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 PRSS55Q6UWB4 352 aaPredicted RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 LIMS2Q7Z4I7 341 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 SCD5Q86SK9 330 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 ZC3HC1Q86WB0 502 aaKnown RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 DENND1CQ8IV53 801 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 RDH11Q8TC12 318 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 PTCD2Q8WV60 388 aaKnown RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 ATP6V1E2Q96A05 226 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 RPL26L1Q9UNX3 145 aaKnown RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 PCDHB12Q9Y5F1 795 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 MT-CO1P00395 513 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 AHSGP02765 367 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 SLC1A2P43004 574 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 PTDSS1P48651 473 aaKnown RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 NDST2P52849 883 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 PGGT1BP53609 377 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 TAS2R39P59534 338 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 MGAT3Q09327 533 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 GALNT3Q14435 633 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 FBXL22Q6P050 247 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 C8orf48Q96LL4 319 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 SCUBE2Q9NQ36 999 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 EPS15L1Q9UBC2 864 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 UBA2Q9UBT2 640 aaPredicted RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 ZCWPW2A0A1B0GU75 182 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 IDH3AP50213 366 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 SLC34A1Q06495 639 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 TBL3Q12788 808 aaKnown RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 TMCO4Q5TGY1 634 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 C16orf59Q7L2K0 433 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 SNX32Q86XE0 403 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 FSTL5Q8N475 847 aaPredicted RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 ZSCAN18Q8TBC5 510 aaPredicted RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 CDK5RAP1Q96SZ6 601 aaKnown RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 KIFC1Q9BW19 673 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 ZCWPW1Q9H0M4 648 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 NUP205Q92621 2012 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 GOLGA8CPA6NN73 597 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 MAFKO60675 156 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 MBL2P11226 248 aaPredicted RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 CTGFP29279 349 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 CLCN5P51795 746 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 POU4F1Q01851 419 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 SEMA3BQ13214 749 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 KHDC1Q4VXA5 237 aaKnown RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 C16orf89Q6UX73 402 aa15.87■□□□□ 0.13
RFX1-201ENST00000254325 SETD3Q86TU7 594 aaPredicted RBP15.87■□□□□ 0.13
RFX1-201ENST00000254325 ULK2Q8IYT8 1036 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms