RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 KIAA1161Q6NSJ0 714 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 GDPD4Q6W3E5 623 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 SPATS2Q86XZ4 545 aaKnown RBP21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 NPWQ8N729 165 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 PNPLA1Q8N8W4 532 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 TMEM145Q8NBT3 493 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 BAHD1Q8TBE0 780 aaPredicted RBP21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 CDC6Q99741 560 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 DEF6Q9H4E7 631 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 SP110Q9HB58 689 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 PDFQ9HBH1 243 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 LHX3Q9UBR4 397 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 GGT7Q9UJ14 662 aa21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 TDRD6O60522 2096 aaKnown RBP21.44■■□□□ 1.02
HCFC1R1-201ENST00000248089 INSIG1O15503 277 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 AP1G1O43747 822 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 PRAMEF11O60813 436 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 ITGAVP06756 1048 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 TPM1P09493 284 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 THEGLP0DJG4 465 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 ARL4AP40617 200 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 SSR1P43307 286 aaKnown RBP21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 ZNF135P52742 658 aaPredicted RBP21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 OVGP1Q12889 678 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 DPYSQ14117 519 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 CYTH1Q15438 398 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 TMEM259Q4ZIN3 620 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 DBX2Q6ZNG2 339 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 IQCHQ86VS3 1027 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 ARHGAP12Q8IWW6 846 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 OXR1Q8N573 874 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 ZNF564Q8TBZ8 553 aaPredicted RBP21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 KLHDC7BQ96G42 594 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 FEM1CQ96JP0 617 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 WASF3Q9UPY6 502 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 APOBEC2Q9Y235 224 aaKnown RBP21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 MFHAS1Q9Y4C4 1052 aa21.43■■□□□ 1.02
HCFC1R1-201ENST00000248089 YKT6O15498 198 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 TRIM16O95361 564 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 PIGNO95427 931 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 RARAP10276 462 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 EPHA8P29322 1005 aaPredicted RBP21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 HNRNPH3P31942 346 aaKnown RBP21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 CLDN2P57739 230 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 SHBQ15464 509 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 DPYSL2Q16555 572 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 LRRK1Q38SD2 2015 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 BOLA3Q53S33 107 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 TXNRD3NBQ6F5E7 133 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 GLRX5Q86SX6 157 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 VSTM4Q8IW00 320 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 CHCHD4Q8N4Q1 142 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 NIPA2Q8N8Q9 360 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 OR8K1Q8NGG5 319 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 RAB7BQ96AH8 199 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 DNAJC7Q99615 494 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 CALN1Q9BXU9 219 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 SLC17A9Q9BYT1 436 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 ZNHIT6Q9NWK9 470 aaKnown RBP21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 FTSJ1Q9UET6 329 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 EPG5Q9HCE0 2579 aa21.42■■□□□ 1.02
HCFC1R1-201ENST00000248089 COL5A1P20908 1838 aaPredicted RBP21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 MYO1FO00160 1098 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 PALMO75781 387 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 GJC1P36383 396 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 HCAR3P49019 387 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 SLC25A11Q02978 314 aaKnown RBP21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 KRT81Q14533 505 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 TSR1Q2NL82 804 aaKnown RBP21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 AFMIDQ63HM1 303 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 GCNT7Q6ZNI0 430 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 ARHGAP36Q6ZRI8 547 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 PTAR1Q7Z6K3 402 aaPredicted RBP21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 TTC7BQ86TV6 843 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 OR13H1Q8NG92 308 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 VOPP1Q96AW1 172 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 CINPQ9BW66 212 aaPredicted RBP21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 PACSIN1Q9BY11 444 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 ERVMER34-1Q9H9K5 563 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 CTTNBP2NLQ9P2B4 639 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 KLK13Q9UKR3 277 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 NENFQ9UMX5 172 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 PTPRBP23467 1997 aa21.41■■□□□ 1.02
HCFC1R1-201ENST00000248089 IGLON5A6NGN9 336 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 SPINT1O43278 529 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 TSPAN6O43657 245 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 SDC3O75056 442 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 PAK4O96013 591 aaPredicted RBP21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 ATXN1LP0C7T5 689 aaKnown RBP21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 XPAP23025 273 aaPredicted RBP21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 AMPD1P23109 780 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 SGCGQ13326 291 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 FGL2Q14314 439 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 SLC18A3Q16572 532 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 CCDC157Q569K6 752 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 CFAP58Q5T655 872 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 TMCO3Q6UWJ1 677 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 SLCO6A1Q86UG4 719 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 TP53INP2Q8IXH6 220 aa21.4■■□□□ 1.02
HCFC1R1-201ENST00000248089 SAP25Q8TEE9 199 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms