RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CCDC78A2IDD5 438 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 INSIG1O15503 277 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 TSHRP16473 764 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 SP100P23497 879 aaPredicted RBP18.81■□□□□ 0.6
SNX17-201ENST00000233575 RHOAP61586 193 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 MESP2Q0VG99 397 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 GRM2Q14416 872 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 POU6F1Q14863 301 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 GEN1Q17RS7 908 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 KBTBD12Q3ZCT8 623 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 PARM1Q6UWI2 310 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 ADIPOR2Q86V24 386 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 FGF14Q92915 247 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 ZNF778Q96MU6 729 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 FCRL3Q96P31 734 aaPredicted RBP18.81■□□□□ 0.6
SNX17-201ENST00000233575 ROPN1BQ9BZX4 212 aaPredicted RBP18.81■□□□□ 0.6
SNX17-201ENST00000233575 ZMYND15Q9H091 742 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 ROPN1Q9HAT0 212 aaPredicted RBP18.81■□□□□ 0.6
SNX17-201ENST00000233575 SCUBE2Q9NQ36 999 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 HPS4Q9NQG7 708 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 IL1RAPL1Q9NZN1 696 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 TBK1Q9UHD2 729 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 COL4A3Q01955 1670 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 GOLGA8KD6RF30 607 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 POLR3GO15318 223 aaPredicted RBP18.8■□□□□ 0.6
SNX17-201ENST00000233575 ZNF821O75541 412 aaPredicted RBP18.8■□□□□ 0.6
SNX17-201ENST00000233575 TCEA3O75764 348 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 SERPINF2P08697 491 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 ATXN1LP0C7T5 689 aaKnown RBP18.8■□□□□ 0.6
SNX17-201ENST00000233575 LAMP2P13473 410 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 BMP1P13497 986 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 PGAM1P18669 254 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 GYS2P54840 703 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 SLC12A1Q13621 1099 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 COL19A1Q14993 1142 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 SLC1A5Q15758 541 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 GAB4Q2WGN9 574 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 SIRPB2Q5JXA9 342 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 CYP4X1Q8N118 509 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 OR6K2Q8NGY2 324 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 GSDMBQ8TAX9 411 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 ATP6V1G3Q96LB4 118 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 NUDCD1Q96RS6 583 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 RPP25Q9BUL9 199 aaKnown RBP18.8■□□□□ 0.6
SNX17-201ENST00000233575 IL22Q9GZX6 179 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 SAMD15Q9P1V8 674 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 RPS6KL1Q9Y6S9 549 aa18.8■□□□□ 0.6
SNX17-201ENST00000233575 LOC285095A0A1B0GVY8 99 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 A0A1W2PPC1 479 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 CXorf49A8MYA2 514 aaPredicted RBP18.79■□□□□ 0.6
SNX17-201ENST00000233575 NPY2RP49146 381 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 GALNT3Q14435 633 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 CRYMQ14894 314 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 STEAP4Q687X5 459 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 TTC8Q8TAM2 541 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 MFSD3Q96ES6 412 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 RIPOR3Q96MK2 946 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 TNKS2Q9H2K2 1166 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 OBP2AQ9NY56 170 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 EURLQ9NYK6 297 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 NOVA2Q9UNW9 492 aaKnown RBP18.79■□□□□ 0.6
SNX17-201ENST00000233575 PCDHGC4Q9Y5F7 938 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 TMEM265A0A087WTH1 108 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 HOXC11O43248 304 aaPredicted RBP18.79■□□□□ 0.6
SNX17-201ENST00000233575 SPAG6O75602 509 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 ADH1CP00326 375 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 PRKCGP05129 697 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 SRCP12931 536 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 POU3F3P20264 500 aaPredicted RBP18.79■□□□□ 0.6
SNX17-201ENST00000233575 CDK18Q07002 472 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 MSLNQ13421 630 aaPredicted RBP18.79■□□□□ 0.6
SNX17-201ENST00000233575 DGKKQ5KSL6 1271 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 KIAA1958Q8N8K9 716 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 SORCS1Q8WY21 1168 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 ATP2A3Q93084 1043 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 CCDC77Q9BR77 488 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 ARNT2Q9HBZ2 717 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 VPS18Q9P253 973 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 SLC17A6Q9P2U8 582 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 FBXO10Q9UK96 956 aa18.79■□□□□ 0.6
SNX17-201ENST00000233575 H3BQ06 376 aaPredicted RBP18.78■□□□□ 0.6
SNX17-201ENST00000233575 RGS16O15492 202 aaPredicted RBP18.78■□□□□ 0.6
SNX17-201ENST00000233575 CISD3P0C7P0 127 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 NMBRP28336 390 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 SLC6A11P48066 632 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 MLLT1Q03111 559 aaPredicted RBP18.78■□□□□ 0.6
SNX17-201ENST00000233575 FCHO2Q0JRZ9 810 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 NAIF1Q69YI7 327 aaPredicted RBP18.78■□□□□ 0.6
SNX17-201ENST00000233575 NCEH1Q6PIU2 408 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 KIAA0907Q7Z7F0 614 aaPredicted RBP18.78■□□□□ 0.6
SNX17-201ENST00000233575 TMEM135Q86UB9 458 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 SMRP1Q8NCR6 262 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 ZNF669Q96BR6 464 aaPredicted RBP18.78■□□□□ 0.6
SNX17-201ENST00000233575 IFT43Q96FT9 208 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 PGM2Q96G03 612 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 TRIB3Q96RU7 358 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 PAFAH2Q99487 392 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 ECT2Q9H8V3 914 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 HAUS2Q9NVX0 235 aa18.78■□□□□ 0.6
SNX17-201ENST00000233575 MOCS1Q9NZB8 636 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms