RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 FNDC3BQ53EP0 1204 aaKnown RBP14.21□□□□□ -0.13
SEC61B-201ENST00000223641 ATXN7L2Q5T6C5 722 aaPredicted RBP14.21□□□□□ -0.13
SEC61B-201ENST00000223641 C9orf64Q5T6V5 341 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 IZUMO3Q5VZ72 239 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 ZDHHC24Q6UX98 284 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 SERPINA13PQ6UXR4 307 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 DPY19L3Q6ZPD9 716 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 Q6ZVU0 165 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.21□□□□□ -0.13
SEC61B-201ENST00000223641 PPIL6Q8IXY8 311 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 SYNPOQ8N3V7 929 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 GPR161Q8N6U8 529 aaKnown RBP14.21□□□□□ -0.13
SEC61B-201ENST00000223641 PDCD7Q8N8D1 485 aaKnown RBP14.21□□□□□ -0.13
SEC61B-201ENST00000223641 EIF1ADQ8N9N8 165 aaKnown RBP14.21□□□□□ -0.13
SEC61B-201ENST00000223641 IL17RCQ8NAC3 791 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 SPOCK2Q92563 424 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 ART4Q93070 314 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 MRGPRX2Q96LB1 330 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 RBM15Q96T37 977 aaKnown RBP eCLIP14.21□□□□□ -0.13
SEC61B-201ENST00000223641 NELL2Q99435 816 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 HINFPQ9BQA5 517 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 FAM129AQ9BZQ8 928 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 EPC1Q9H2F5 836 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 DPH5Q9H2P9 285 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 CD248Q9HCU0 757 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 SCUBE2Q9NQ36 999 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 SUN2Q9UH99 717 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 MRPS17Q9Y2R5 130 aaKnown RBP14.21□□□□□ -0.13
SEC61B-201ENST00000223641 TTLL3Q9Y4R7 772 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 STON1Q9Y6Q2 735 aa14.21□□□□□ -0.13
SEC61B-201ENST00000223641 VCANP13611 3396 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ATG2BQ96BY7 2078 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 LOC285095A0A1B0GVY8 99 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ESYT3A0FGR9 886 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 GOLGA6CA6NDK9 693 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 GOLGA6BA6NDN3 693 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 TRAFD1O14545 582 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 FZD6O60353 706 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 TMEM63AO94886 807 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 EPOP01588 193 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 APRTP07741 180 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 GOLGA6DP0CG33 693 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 HLA-EP13747 358 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 PRKCHP24723 683 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 TARSP26639 723 aaKnown RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ECHS1P30084 290 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 NTSR1P30989 418 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 TIE1P35590 1138 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ITGA8P53708 1063 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ZXDAP98168 799 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 CAV1Q03135 178 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 CAMK2GQ13555 558 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 CUL1Q13616 776 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 NAA30Q147X3 362 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 GRM3Q14832 879 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ANKRD22Q5VYY1 191 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 WDR93Q6P2C0 686 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 RANBP10Q6VN20 620 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 TRMT11Q7Z4G4 463 aaKnown RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 IFT20Q8IY31 132 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 CHPFQ8IZ52 775 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 TAB3Q8N5C8 712 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ZNF366Q8N895 744 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 MCUQ8NE86 351 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 PRCCQ92733 491 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 LRIG1Q96JA1 1093 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 NECAB3Q96P71 396 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 TUBGCP5Q96RT8 1024 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 TRIB3Q96RU7 358 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 FAM129BQ96TA1 746 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 OSBPL6Q9BZF3 934 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 MTG2Q9H4K7 406 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ARNT2Q9HBZ2 717 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 LTB4R2Q9NPC1 389 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ZDHHC4Q9NPG8 344 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ZDHHC18Q9NUE0 388 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 CACNA2D2Q9NY47 1150 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 GOLGA6AQ9NYA3 693 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 UBP1Q9NZI7 540 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 EVLQ9UI08 416 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 FBXL21Q9UKT6 434 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 SHOC2Q9UQ13 582 aa14.2□□□□□ -0.14
SEC61B-201ENST00000223641 ARIH1Q9Y4X5 557 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 V9GYY5 206 aaPredicted RBP14.2□□□□□ -0.14
SEC61B-201ENST00000223641 CHURC1-FNTBB4DL54 471 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 F5H423 210 aaPredicted RBP14.19□□□□□ -0.14
SEC61B-201ENST00000223641 ALOX15BO15296 676 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 HTRA2O43464 458 aaPredicted RBP14.19□□□□□ -0.14
SEC61B-201ENST00000223641 ADAM23O75077 832 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 RNF40O75150 1001 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 SOCS5O75159 536 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 SIN3BO75182 1162 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 PRLP01236 227 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 RECQLP46063 649 aaPredicted RBP14.19□□□□□ -0.14
SEC61B-201ENST00000223641 CARSP49589 748 aaKnown RBP14.19□□□□□ -0.14
SEC61B-201ENST00000223641 SEC13P55735 322 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 WNT3AP56704 352 aa14.19□□□□□ -0.14
SEC61B-201ENST00000223641 RAD51Q06609 339 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms