RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 SPATA31D4Q6ZUB0 917 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 CRLF3Q8IUI8 442 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 EFCAB3Q8N7B9 438 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 AUTS2Q8WXX7 1259 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 ZNF689Q96CS4 500 aaPredicted RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 SMIM14Q96QK8 99 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 NR1H4Q96RI1 486 aaPredicted RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 MARCH2Q9P0N8 246 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 PCDHB8Q9UN66 801 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 PCDHB5Q9Y5E4 795 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 GOLGA8QA0A0J9YX86 632 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 LOC100653049A0A140TA62 436 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 ZCWPW2A0A1B0GU75 182 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 GOLGA8OA6NCC3 632 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 ZNF487B1APH4 448 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 GOLGA8NF8WBI6 632 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 TK2O00142 265 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 TSPAN3O60637 253 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 MAFKO60675 156 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 ENTPD5O75356 428 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 ZMPSTE24O75844 475 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 KRT34O76011 436 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 CSF2RAP15509 400 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 ACVRL1P37023 503 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 GP5P40197 560 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 USP10Q14694 798 aaKnown RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 RNF220Q5VTB9 566 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 C4orf22Q6V702 233 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 NCCRP1Q6ZVX7 275 aaPredicted RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 RPS27LQ71UM5 84 aaKnown RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 CHSY1Q86X52 802 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 GBP7Q8N8V2 638 aaPredicted RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 OR6P1Q8NGX9 317 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 TTC8Q8TAM2 541 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 ZNF180Q9UJW8 692 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 KCTD3Q9Y597 815 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 GSTA1P08263 222 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 TSHRP16473 764 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 YWHAQP27348 245 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 CDK16Q00536 496 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 TEDDM1Q5T9Z0 273 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 PTAR1Q7Z6K3 402 aaPredicted RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 DCP1BQ8IZD4 617 aaKnown RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 BCL7CQ8WUZ0 217 aaPredicted RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 CLPTM1LQ96KA5 538 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 ZNF512Q96ME7 567 aaPredicted RBP10.09□□□□□ -0.79
USP11-201ENST00000218348 TASP1Q9H6P5 420 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 GKN1Q9NS71 199 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 TXLNGQ9NUQ3 528 aa10.09□□□□□ -0.79
USP11-201ENST00000218348 C2P06681 752 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 ESRRAP11474 423 aaPredicted RBP10.08□□□□□ -0.8
USP11-201ENST00000218348 NCF2P19878 526 aaPredicted RBP10.08□□□□□ -0.8
USP11-201ENST00000218348 ARRB2P32121 409 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 SERPINB9P50453 376 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 CDH17Q12864 832 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 BLMHQ13867 455 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 HSF5Q4G112 596 aaPredicted RBP10.08□□□□□ -0.8
USP11-201ENST00000218348 ZNF789Q5FWF6 425 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 NAT14Q8WUY8 206 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 KCTD4Q8WVF5 259 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 APBB2Q92870 758 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 SLC7A6OSQ96CW6 309 aaPredicted RBP10.08□□□□□ -0.8
USP11-201ENST00000218348 VPS39Q96JC1 886 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 TBL1YQ9BQ87 522 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 SP110Q9HB58 689 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 GLOD4Q9HC38 313 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 TMEM39AQ9NV64 488 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 PACSIN3Q9UKS6 424 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 PRELID1Q9Y255 219 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 ANKRD12Q6UB98 2062 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 KCNU1A8MYU2 1149 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 PLIN3O60664 434 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 MLNP12872 115 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 OR1D2P34982 312 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 CRHR1P34998 444 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 SLC1A6P48664 564 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 PLK1P53350 603 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 SLC18A1P54219 525 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 PLOD1Q02809 727 aaPredicted RBP10.08□□□□□ -0.8
USP11-201ENST00000218348 PTPRRQ15256 657 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 ATG16L1Q676U5 607 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 KIAA1841Q6NSI8 718 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 FBXL22Q6P050 247 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.08□□□□□ -0.8
USP11-201ENST00000218348 MARK2Q7KZI7 788 aaKnown RBP10.08□□□□□ -0.8
USP11-201ENST00000218348 MON1AQ86VX9 555 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 TREML1Q86YW5 311 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 SMYD1Q8NB12 490 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 EXT2Q93063 718 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 SMOC2Q9H3U7 446 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 ELAC1Q9H777 363 aaKnown RBP10.08□□□□□ -0.8
USP11-201ENST00000218348 CATSPERBQ9H7T0 1116 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 CYP4F12Q9HCS2 524 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 SSU72Q9NP77 194 aaKnown RBP10.08□□□□□ -0.8
USP11-201ENST00000218348 CASS4Q9NQ75 786 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 TSR3Q9UJK0 312 aaKnown RBP10.08□□□□□ -0.8
USP11-201ENST00000218348 MYO9BQ13459 2157 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 PTPRDP23468 1912 aa10.08□□□□□ -0.8
USP11-201ENST00000218348 A6NHS1 94 aa10.07□□□□□ -0.8
USP11-201ENST00000218348 OR1E1P30953 314 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms