RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF556Q9HAH1 456 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 ARHGAP28Q9P2N2 729 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 AKAP12Q02952 1782 aa13.88□□□□□ -0.19
SIX4-201ENST00000216513 A8MU76 341 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 AVILO75366 819 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 TPBGLP0DKB5 382 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 GNPDA1P46926 289 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 PLK1P53350 603 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 PAGE2BQ5JRK9 111 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 LRRC6Q86X45 466 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 FBXO39Q8N4B4 442 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 OR52K1Q8NGK4 314 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 DQX1Q8TE96 717 aaKnown RBP13.87□□□□□ -0.19
SIX4-201ENST00000216513 FAM126AQ9BYI3 521 aaPredicted RBP13.87□□□□□ -0.19
SIX4-201ENST00000216513 CDHR5Q9HBB8 845 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 NRXN3Q9Y4C0 1643 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 KRT6AP02538 564 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 KRT6BP04259 564 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 ITGAVP06756 1048 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 RBP1P09455 135 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 KRT6CP48668 564 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 SHC3Q92529 594 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 NAT9Q9BTE0 207 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 A0A1B0GVM2 712 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 TCAF2A6NFQ2 919 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 CDK14O94921 469 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 SEMG2Q02383 582 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 NR6A1Q15406 480 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 CNGA3Q16281 694 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 TAPT1Q6NXT6 567 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 BEND7Q8N7W2 519 aaPredicted RBP13.87□□□□□ -0.19
SIX4-201ENST00000216513 LHX5Q9H2C1 402 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 ZNF711Q9Y462 761 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 EIF3HO15372 352 aaKnown RBP eCLIP13.87□□□□□ -0.19
SIX4-201ENST00000216513 MAPK10P53779 464 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 DLG2Q15700 870 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 FNBP1LQ5T0N5 605 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 MRPL1Q9BYD6 325 aaKnown RBP13.87□□□□□ -0.19
SIX4-201ENST00000216513 FBXL12Q9NXK8 326 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 ATP6V1HQ9UI12 483 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 H3BQF6 201 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 TM7SF2O76062 418 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 RHOP08100 348 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 WARSP23381 471 aaKnown RBP13.87□□□□□ -0.19
SIX4-201ENST00000216513 CDH4P55283 916 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 MGAT5Q09328 741 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 CYP51A1Q16850 503 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 ATAD3BQ5T9A4 648 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 ZC3H14Q6PJT7 736 aaKnown RBP13.87□□□□□ -0.19
SIX4-201ENST00000216513 SLC9A9Q8IVB4 645 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 SPATA6LQ8N4H0 392 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 MTMR8Q96EF0 704 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 SUSD3Q96L08 255 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 INTS7Q9NVH2 962 aaKnown RBP13.87□□□□□ -0.19
SIX4-201ENST00000216513 OR10H1Q9Y4A9 318 aa13.87□□□□□ -0.19
SIX4-201ENST00000216513 URADA6NGE7 173 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 CDH16O75309 829 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 GALTP07902 379 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 PABPC1P11940 636 aaKnown RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 ARRB1P49407 418 aaPredicted RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 XKR4Q5GH76 650 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 EPS8L1Q8TE68 723 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 ATOH1Q92858 354 aaPredicted RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 PACSIN3Q9UKS6 424 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 SNX10Q9Y5X0 201 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 PLIN4Q96Q06 1357 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 H3BMM5 538 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 CILPO75339 1184 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 POP4O95707 220 aaKnown RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 SH3BGRP55822 239 aaPredicted RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 TBL3Q12788 808 aaKnown RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 CMTR2Q8IYT2 770 aaKnown RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 PTPN18Q99952 460 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 WWP1Q9H0M0 922 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 RMND5AQ9H871 391 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 CIDEBQ9UHD4 219 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 ITGAXP20702 1163 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 CSKP41240 450 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 PRKAG1P54619 331 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 IRF5Q13568 498 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 AFTPHQ6ULP2 937 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 MILR1Q7Z6M3 343 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 HORMAD1Q86X24 394 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 LMX1AQ8TE12 382 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 NUSAP1Q9BXS6 441 aaKnown RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 DMGDHQ9UI17 866 aaKnown RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 RABGEF1Q9UJ41 708 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 CHRNA1P02708 482 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 COL6A1P12109 1028 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 LPOP22079 712 aaPredicted RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 MC4RP32245 332 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 IL2P60568 153 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 RNF19BQ6ZMZ0 732 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 P2RY13Q9BPV8 354 aa13.86□□□□□ -0.19
SIX4-201ENST00000216513 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 USP15Q9Y4E8 981 aaPredicted RBP13.86□□□□□ -0.19
SIX4-201ENST00000216513 COLEC10Q9Y6Z7 277 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms