RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 C6orf52Q5T4I8 152 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 ATAD3BQ5T9A4 648 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 RAET1GQ6H3X3 334 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 FBXL19Q6PCT2 694 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 RNF19BQ6ZMZ0 732 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 LRRC39Q96DD0 335 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 B3GALT6Q96L58 329 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 AGXT2Q9BYV1 514 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 OSER1Q9NX31 292 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 RABGEF1Q9UJ41 708 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 ANGPT4Q9Y264 503 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 SMIM31A0A1B0GVY4 71 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PIK3R1P27986 724 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 ANXA11P50995 505 aaKnown RBP13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 RFX4Q33E94 735 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PPM1LQ5SGD2 360 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 C8orf59Q8N0T1 100 aaPredicted RBP13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PCDHB18PQ96TA0 734 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 HBEGFQ99075 208 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PHACTR1Q9C0D0 580 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 NCAM2O15394 837 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 CST1P01037 141 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 IFNA16P05015 189 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 POLR2EP19388 210 aaKnown RBP13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PTPN5P54829 565 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 DEF8Q6ZN54 512 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 VANGL1Q8TAA9 524 aaPredicted RBP13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 DNAJC19Q96DA6 116 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 SEMA3CQ99985 751 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 OSBPL6Q9BZF3 934 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PRDM12Q9H4Q4 367 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 ALG2Q9H553 416 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 SNX15Q9NRS6 342 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 R3HDM2Q9Y2K5 976 aaKnown RBP13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 NFASCO94856 1347 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 A0A0A0MRY4 1105 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 ADCY6O43306 1168 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PSMD10O75832 226 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 OR6A2O95222 327 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 BRCC3P46736 316 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 SPIBQ01892 262 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 OFCC1Q8IZS5 231 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 OR10G6Q8NH81 332 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 LENG1Q96BZ8 264 aaPredicted RBP13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 SPATA13Q96N96 652 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 TBC1D3BA6NDS4 549 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 MAP2K7O14733 419 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 XKR6Q5GH73 641 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 SNAP47Q5SQN1 464 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PIGZQ86VD9 579 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 AZIN2Q96A70 460 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 VPS35Q96QK1 796 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 C9orf16Q9BUW7 83 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 FAM126AQ9BYI3 521 aaPredicted RBP13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 UMODL1Q5DID0 1318 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 COL5A2P05997 1499 aaPredicted RBP13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 CD48P09326 243 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 NRLP54845 237 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PSME3P61289 254 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 DGUOKQ16854 277 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 KLHL12Q53G59 568 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 HYIQ5T013 277 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 PIGKQ92643 395 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 EQTNQ9NQ60 294 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 XPR1Q9UBH6 696 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 NWD1Q149M9 1564 aa13.72□□□□□ -0.21
TGFBR3-201ENST00000212355 SNRPB2P08579 225 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 CASP9P55211 416 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 NOL9Q5SY16 702 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 LRRC55Q6ZSA7 311 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 C7orf57Q8NEG2 295 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 TSPAN14Q8NG11 270 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 GTF3C2Q8WUA4 911 aaPredicted RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 PMM1Q92871 262 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 ART4Q93070 314 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 WNT8BQ93098 351 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 CYP2S1Q96SQ9 504 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 NXF3Q9H4D5 531 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 KCNK4Q9NYG8 393 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 CNOT6Q9ULM6 557 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 STARD13Q9Y3M8 1113 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 PCDHGC5Q9Y5F6 944 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 PSIP1O75475 530 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 PABPC1P11940 636 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 NPR3P17342 541 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 CD52P31358 61 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 USP46P62068 366 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 CELF3Q5SZQ8 465 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 FBXW8Q8N3Y1 598 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 CERS5Q8N5B7 392 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 TMEM161BQ8NDZ6 487 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 PIWIL2Q8TC59 973 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 HDAC10Q969S8 669 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 ACO2Q99798 780 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 NOL11Q9H8H0 719 aaKnown RBP13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 RNPEPL1Q9HAU8 725 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 DYRK3O43781 588 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 ITGA2BP08514 1039 aa13.71□□□□□ -0.21
TGFBR3-201ENST00000212355 IGFBP4P22692 258 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms