RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ATG2BQ96BY7 2078 aa10.71□□□□□ -0.69
CD4-201ENST00000011653 A0A0G2JND7 137 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 CCDC78A2IDD5 438 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 CCDC22O60826 627 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 RAMP2O60895 175 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 SMNDC1O75940 238 aaKnown RBP eCLIP10.71□□□□□ -0.7
CD4-201ENST00000011653 TMEM63AO94886 807 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 GM2AP17900 193 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 RING1Q06587 406 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 CDH18Q13634 790 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 POLD3Q15054 466 aaPredicted RBP10.71□□□□□ -0.7
CD4-201ENST00000011653 TSNAXIP1Q2TAA8 658 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 CAPRIN2Q6IMN6 1127 aaKnown RBP10.71□□□□□ -0.7
CD4-201ENST00000011653 TRIM74Q86UV6 250 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 TRIM73Q86UV7 250 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 RTL3Q8N8U3 475 aaKnown RBP10.71□□□□□ -0.7
CD4-201ENST00000011653 RFWD2Q8NHY2 731 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 DENND2DQ9H6A0 471 aaPredicted RBP10.71□□□□□ -0.7
CD4-201ENST00000011653 TASP1Q9H6P5 420 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 SP110Q9HB58 689 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 IPO11Q9UI26 975 aaKnown RBP10.71□□□□□ -0.7
CD4-201ENST00000011653 CHMP2BQ9UQN3 213 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 LRRC42Q9Y546 428 aa10.71□□□□□ -0.7
CD4-201ENST00000011653 H0Y3Z8 333 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 SOX1O00570 391 aaPredicted RBP10.7□□□□□ -0.7
CD4-201ENST00000011653 TRIM24O15164 1050 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 PIAS1O75925 651 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 METTL18O95568 372 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 PPP3CCP48454 512 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 ARFIP2P53365 341 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 ZBTB16Q05516 673 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 ADGRE1Q14246 886 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 FSCBQ5H9T9 825 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 PDE12Q6L8Q7 609 aaKnown RBP10.7□□□□□ -0.7
CD4-201ENST00000011653 LMNTD2Q8IXW0 634 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.7□□□□□ -0.7
CD4-201ENST00000011653 PAF1Q8N7H5 531 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 WFDC5Q8TCV5 224 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 FGF13Q92913 245 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 PLD4Q96BZ4 506 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 WDR83Q9BRX9 315 aaKnown RBP10.7□□□□□ -0.7
CD4-201ENST00000011653 FAM167BQ9BTA0 163 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 DCLRE1BQ9H816 532 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 USP29Q9HBJ7 922 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 DPP7Q9UHL4 492 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 CLEC4EQ9ULY5 219 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 PATJQ8NI35 1801 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 ANAPC1Q9H1A4 1944 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.7□□□□□ -0.7
CD4-201ENST00000011653 NEDD8-MDP1E9PL57 170 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 AVILO75366 819 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 IGLV3-27P01718 113 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 RHOCP08134 193 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 INHBAP08476 426 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 HNRNPA1P09651 372 aaKnown RBP eCLIP10.7□□□□□ -0.7
CD4-201ENST00000011653 GARSP41250 739 aaKnown RBP10.7□□□□□ -0.7
CD4-201ENST00000011653 ZNF177Q13360 481 aaPredicted RBP10.7□□□□□ -0.7
CD4-201ENST00000011653 CTC1Q2NKJ3 1217 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 RABGAP1LQ5R372 815 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 SNX30Q5VWJ9 437 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 OTOP3Q7RTS5 596 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 ZNF276Q8N554 614 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 APOPT1Q96IL0 206 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 ZDHHC7Q9NXF8 308 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 RCOR3Q9P2K3 495 aaPredicted RBP10.7□□□□□ -0.7
CD4-201ENST00000011653 HEY2Q9UBP5 337 aa10.7□□□□□ -0.7
CD4-201ENST00000011653 CORO1CQ9ULV4 474 aaPredicted RBP10.7□□□□□ -0.7
CD4-201ENST00000011653 MTO1Q9Y2Z2 717 aaKnown RBP10.7□□□□□ -0.7
CD4-201ENST00000011653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.69□□□□□ -0.7
CD4-201ENST00000011653 TYW5A2RUC4 315 aaKnown RBP10.69□□□□□ -0.7
CD4-201ENST00000011653 CFAP69A5D8W1 941 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 ENTPD5O75356 428 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 C1RP00736 705 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 FSHRP23945 695 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 PSMB4P28070 264 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 NR2C2P49116 596 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 ZBTB17Q13105 803 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 PAFAH1B3Q15102 231 aaKnown RBP10.69□□□□□ -0.7
CD4-201ENST00000011653 CMPK2Q5EBM0 449 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 RNF219Q5W0B1 726 aaPredicted RBP10.69□□□□□ -0.7
CD4-201ENST00000011653 SYCE2Q6PIF2 218 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 TMEM25Q86YD3 366 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 MFN1Q8IWA4 741 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 ARHGAP12Q8IWW6 846 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 CEP295NLQ96MC4 621 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 FERMT1Q9BQL6 677 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 OSBPL1AQ9BXW6 950 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 C12orf65Q9H3J6 166 aaKnown RBP10.69□□□□□ -0.7
CD4-201ENST00000011653 SFXN1Q9H9B4 322 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 NT5MQ9NPB1 228 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 ZBTB24O43167 697 aaPredicted RBP10.69□□□□□ -0.7
CD4-201ENST00000011653 SNAP91O60641 907 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 SKAP2O75563 359 aaPredicted RBP10.69□□□□□ -0.7
CD4-201ENST00000011653 SPAG6O75602 509 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 RHOQP17081 205 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 MZF1P28698 734 aaPredicted RBP10.69□□□□□ -0.7
CD4-201ENST00000011653 GRIA1P42261 906 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 CDK16Q00536 496 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 PCSK7Q16549 785 aa10.69□□□□□ -0.7
CD4-201ENST00000011653 MANEALQ5VSG8 457 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms