RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 CHRNA4P43681 627 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 CSRP3P50461 194 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 NDST2P52849 883 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 TMED1Q13445 227 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 HMBOX1Q6NT76 420 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 SPPL2BQ8TCT7 592 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 DIS3LQ8TF46 1054 aaKnown RBP14.19□□□□□ -0.14
USH1C-201ENST00000005226 GAB3Q8WWW8 586 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 PPWD1Q96BP3 646 aaKnown RBP14.19□□□□□ -0.14
USH1C-201ENST00000005226 LRCH3Q96II8 777 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 PLEKHA5Q9HAU0 1116 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 VTI1BQ9UEU0 232 aa14.19□□□□□ -0.14
USH1C-201ENST00000005226 LOC285556D6RIA3 1793 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 DFFAO00273 331 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 HUS1O60921 280 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 APOA4P06727 396 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 YWHAQP27348 245 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 SOX11P35716 441 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 ETFBP38117 255 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 SULT2A1Q06520 285 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 RBM20Q5T481 1227 aaKnown RBP14.18□□□□□ -0.14
USH1C-201ENST00000005226 ALKAL1Q6UXT8 129 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 SETD3Q86TU7 594 aaPredicted RBP14.18□□□□□ -0.14
USH1C-201ENST00000005226 SLC45A3Q96JT2 553 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 TEKT5Q96M29 485 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 SIK2Q9H0K1 926 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 DNAAF2Q9NVR5 837 aaKnown RBP14.18□□□□□ -0.14
USH1C-201ENST00000005226 BCAP29Q9UHQ4 241 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 A0A0G2JMZ2 1700 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 LRRC37A2A6NM11 1700 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 SLC25A27O95847 323 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 STMN1P16949 149 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 ARNTP27540 789 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 STT3AP46977 705 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 RAB10P61026 200 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 CDH17Q12864 832 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 DCAF4L1Q3SXM0 396 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 REP15Q6BDI9 236 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 CLEC6AQ6EIG7 209 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 RWDD4Q6NW29 188 aaKnown RBP14.18□□□□□ -0.14
USH1C-201ENST00000005226 BNIPLQ7Z465 357 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 CPNE9Q8IYJ1 553 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 ARRDC4Q8NCT1 418 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 DLG3Q92796 817 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 HSPBAP1Q96EW2 488 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 TRIM8Q9BZR9 551 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 TKTL2Q9H0I9 626 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 ADAMTS10Q9H324 1103 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 CACNA2D2Q9NY47 1150 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 GIMAP2Q9UG22 337 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 OR12D3Q9UGF7 316 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 MID2Q9UJV3 735 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 UBQLN1Q9UMX0 589 aaKnown RBP14.18□□□□□ -0.14
USH1C-201ENST00000005226 ANKRD6Q9Y2G4 727 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 WDR90Q96KV7 1748 aa14.18□□□□□ -0.14
USH1C-201ENST00000005226 CROCCQ5TZA2 2017 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 ARHGAP10A1A4S6 786 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 MAGEB16A2A368 324 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 FAM149AA5PLN7 773 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 SAC3D1A6NKF1 404 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 TMX2-CTNND1H3BSU7 103 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 PMPCBO75439 489 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 LRIG2O94898 1065 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 SLC1A2P43004 574 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 TAF6P49848 677 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 EMP3P54852 163 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 LILRA4P59901 499 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 YBX1P67809 324 aaKnown RBP14.17□□□□□ -0.14
USH1C-201ENST00000005226 SEMA3BQ13214 749 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 SEPT6Q14141 434 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 FASTKQ14296 549 aaKnown RBP14.17□□□□□ -0.14
USH1C-201ENST00000005226 HERC3Q15034 1050 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 PDZD4Q76G19 769 aaPredicted RBP14.17□□□□□ -0.14
USH1C-201ENST00000005226 RDH11Q8TC12 318 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 TMEM40Q8WWA1 233 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 ASB9Q96DX5 294 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 SLC2A13Q96QE2 648 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 HNRNPABQ99729 332 aaKnown RBP14.17□□□□□ -0.14
USH1C-201ENST00000005226 FICDQ9BVA6 458 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 FAM124BQ9H5Z6 455 aaPredicted RBP14.17□□□□□ -0.14
USH1C-201ENST00000005226 OLAHQ9NV23 265 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 PLK2Q9NYY3 685 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 FBXW11Q9UKB1 542 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 CEP350Q5VT06 3117 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 PDLIM1O00151 329 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 PSMD12O00232 456 aaPredicted RBP14.17□□□□□ -0.14
USH1C-201ENST00000005226 TPST1O60507 370 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 ADARP55265 1226 aaKnown RBP14.17□□□□□ -0.14
USH1C-201ENST00000005226 LRP8Q14114 963 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 DDI1Q8WTU0 396 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 KIFC1Q9BW19 673 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 GPRC5DQ9NZD1 345 aa14.17□□□□□ -0.14
USH1C-201ENST00000005226 PIN4Q9Y237 131 aaKnown RBP14.17□□□□□ -0.14
USH1C-201ENST00000005226 CCL22O00626 93 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 SOCS2O14508 198 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 SEC24DO94855 1032 aaPredicted RBP14.16□□□□□ -0.14
USH1C-201ENST00000005226 CAPNS1P04632 268 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 GNAO1P09471 354 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 ZNF470Q6ECI4 717 aa14.16□□□□□ -0.14
USH1C-201ENST00000005226 KRT80Q6KB66 452 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms